Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0231 |
Symbol | |
ID | 8017854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 243879 |
End bp | 244397 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829011 |
Product | preprotein translocase subunit SecB |
Protein accession | YP_002980211 |
Protein GI | 241661851 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1952] Preprotein translocase subunit SecB |
TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00543911 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGACC AGCAACAACA GCAACCGGGC CAGGATGGCC AGCCGTTCTT CAACATCCAG CGCGTCTATC TGAAGGACCT GTCGCTGGAA CAACCGAACT CGCCGCACAT CTTCCTCGAG CAGGAACAGC CGACTGTCGA AGTGCAGGTG GACGTCGGCG CTTCGCAACT GGCGGAAGGC GTGTTTGAAG TGACCGTCAT CGGTACGGTG ACGACCAAGG TGCAAGAGAA GGTCGCGTTC CTGGTGGAAG CCAAGCAAGC GGGCATCTTC GATATCCGCA ACGTGCCGGC CGAGCAGATG GACCCGCTGC TGGGCATCGC CTGCCCGACC ATCGTGTACC CGTACCTGCG CTCGAACATT GCCGACACCA TCGGCCGCGC CGGCTTCCAG CCGATCCACC TGGCCGAGAT CAACTTCCAG GCGCTGTACG AACAACGCCT GGCCGCTGCC ATGGAGCAGC AAGGCCAAGC CGGCGGCGCT GGTCTGGTGA TGCCGGACGG CTCGAAGGCC ACCCACTAA
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Protein sequence | MSDQQQQQPG QDGQPFFNIQ RVYLKDLSLE QPNSPHIFLE QEQPTVEVQV DVGASQLAEG VFEVTVIGTV TTKVQEKVAF LVEAKQAGIF DIRNVPAEQM DPLLGIACPT IVYPYLRSNI ADTIGRAGFQ PIHLAEINFQ ALYEQRLAAA MEQQGQAGGA GLVMPDGSKA TH
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