Gene Rpic12D_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0221 
Symbol 
ID8017844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp235850 
End bp236305 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content63% 
IMG OID644829001 
ProductPTS system fructose subfamily IIA component 
Protein accessionYP_002980201 
Protein GI241661841 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2893] Phosphotransferase system, mannose/fructose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000694463 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGGGA TTCTGATCAT CGCCCATGCG CCGCTAGCCA GCGCACTGCG CGACTGTGCT 
GCACACGTCT ATTGCGGTCA GCCCGAGCGG CTGGACGCAA TCGATGTCCT GCCCGATGCC
GAGCCAGCGA CCGTGCTGGC GCAGGCGCGC GATAAGCTCG CCGAACTCAT TGAAGCCAAC
GGCGCACTGG TGCTGACCGA CATCTTCGGG GCTACCCCTG CCAATATCGC CTCGCGTCTG
GCTGACCCTG GCCGCGTGCG CGTGCTGGCT GGCGTGAACC TGCCGATGCT TGTGCGCGCC
ATCTGCTATC GCTCCGAAAA ACTCGAACAA CTTGCCGCCA AGGCCCTGGC CGGCGGCGCG
CAAGGCGTAC TGCAGGTCGG CTCGACAGCC GTTCAGAACC AGGTTGCCAA CCATCCGGAC
AAATATGCTG CAGAGGGATA TCACCATCAT CAATAA
 
Protein sequence
MAGILIIAHA PLASALRDCA AHVYCGQPER LDAIDVLPDA EPATVLAQAR DKLAELIEAN 
GALVLTDIFG ATPANIASRL ADPGRVRVLA GVNLPMLVRA ICYRSEKLEQ LAAKALAGGA
QGVLQVGSTA VQNQVANHPD KYAAEGYHHH Q