Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0221 |
Symbol | |
ID | 8017844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 235850 |
End bp | 236305 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829001 |
Product | PTS system fructose subfamily IIA component |
Protein accession | YP_002980201 |
Protein GI | 241661841 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2893] Phosphotransferase system, mannose/fructose-specific component IIA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000694463 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGGGA TTCTGATCAT CGCCCATGCG CCGCTAGCCA GCGCACTGCG CGACTGTGCT GCACACGTCT ATTGCGGTCA GCCCGAGCGG CTGGACGCAA TCGATGTCCT GCCCGATGCC GAGCCAGCGA CCGTGCTGGC GCAGGCGCGC GATAAGCTCG CCGAACTCAT TGAAGCCAAC GGCGCACTGG TGCTGACCGA CATCTTCGGG GCTACCCCTG CCAATATCGC CTCGCGTCTG GCTGACCCTG GCCGCGTGCG CGTGCTGGCT GGCGTGAACC TGCCGATGCT TGTGCGCGCC ATCTGCTATC GCTCCGAAAA ACTCGAACAA CTTGCCGCCA AGGCCCTGGC CGGCGGCGCG CAAGGCGTAC TGCAGGTCGG CTCGACAGCC GTTCAGAACC AGGTTGCCAA CCATCCGGAC AAATATGCTG CAGAGGGATA TCACCATCAT CAATAA
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Protein sequence | MAGILIIAHA PLASALRDCA AHVYCGQPER LDAIDVLPDA EPATVLAQAR DKLAELIEAN GALVLTDIFG ATPANIASRL ADPGRVRVLA GVNLPMLVRA ICYRSEKLEQ LAAKALAGGA QGVLQVGSTA VQNQVANHPD KYAAEGYHHH Q
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