Gene Rpic12D_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0203 
Symbol 
ID8017826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp213242 
End bp214132 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content56% 
IMG OID644828984 
ProductTniB family protein 
Protein accessionYP_002980184 
Protein GI241661824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000461538 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCAAT ACATGCATGT CCATCCCGAT TTCCTACCTA TCATGGCATT GTCAGGTGAG 
GAACGCATCG CTGCAATGGA CCAACCACGG TGGATCGGGT ATCCGCGGGC GATAGAGATT
CTTGATCTGC TGCAAGGCCT GCTGACCAAA CCGAAGCGCC CGCGCATGCC AAATCTGCTG
ATCGTGGGGG ATTCAAACAA TGGTAAGACC ACGCTGATCG AGCGTTTCCG CGAATTGTGC
GGAACATCCT ATGTGGATGG GAGCGGAGAT CCCGTAAGGC CAGTAGTTAT TGCCGAAGCT
CCAACCAGCG CGGATGAGCG ATCGCTCTAT GTCTCCGTGC TAGAGCGCTT CTGGACACCT
TACAAGCCGA CTGATTCGAT CCCGAAGCTA CGCTATCAAT TGATTCACTT GATGCGGGCC
TGCAATGTGC AGATGTTGGT TCTCGATGAA ATGCATTCTC TTCTCACGGG AACTACAACG
AAGCAGCGCG AGGTGATGAA CGCGCTCAAG CTGCTCTGCA ATGAACTGCG CATTCCGATC
GTCGGTGTCG GTACACGAGA AGCGGTCCGC GTGCTGCATA CGGACCCTCA GCACGCAAGT
CGTTTCGACG TCGCGTCATT GCCAGCGTGG AGCCCGGACA AAGAGTTTCA ACGCTTGCTC
GCCAGCTTCG AACGAGTACT GCCGCTAAAG CACCCTTCCA GACTACATGC GCCCGAGCTG
GCCAGCCGGC TGCATGCCAT TTCGGAAGGA AACATCGGCA ACCTTCATCG ACTGTTAGTG
GCTTGTGCGA CGCAGGCCAT TCGCGCCGGC TCAGAGCAGA TTGATGTCGC CATTGTTGAG
AAGAATCAAT GGATACGCCC CACACGGGGC ATCCGGGAGC TATTTGCGTG A
 
Protein sequence
MTQYMHVHPD FLPIMALSGE ERIAAMDQPR WIGYPRAIEI LDLLQGLLTK PKRPRMPNLL 
IVGDSNNGKT TLIERFRELC GTSYVDGSGD PVRPVVIAEA PTSADERSLY VSVLERFWTP
YKPTDSIPKL RYQLIHLMRA CNVQMLVLDE MHSLLTGTTT KQREVMNALK LLCNELRIPI
VGVGTREAVR VLHTDPQHAS RFDVASLPAW SPDKEFQRLL ASFERVLPLK HPSRLHAPEL
ASRLHAISEG NIGNLHRLLV ACATQAIRAG SEQIDVAIVE KNQWIRPTRG IRELFA