Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0203 |
Symbol | |
ID | 8017826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 213242 |
End bp | 214132 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644828984 |
Product | TniB family protein |
Protein accession | YP_002980184 |
Protein GI | 241661824 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000461538 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCAAT ACATGCATGT CCATCCCGAT TTCCTACCTA TCATGGCATT GTCAGGTGAG GAACGCATCG CTGCAATGGA CCAACCACGG TGGATCGGGT ATCCGCGGGC GATAGAGATT CTTGATCTGC TGCAAGGCCT GCTGACCAAA CCGAAGCGCC CGCGCATGCC AAATCTGCTG ATCGTGGGGG ATTCAAACAA TGGTAAGACC ACGCTGATCG AGCGTTTCCG CGAATTGTGC GGAACATCCT ATGTGGATGG GAGCGGAGAT CCCGTAAGGC CAGTAGTTAT TGCCGAAGCT CCAACCAGCG CGGATGAGCG ATCGCTCTAT GTCTCCGTGC TAGAGCGCTT CTGGACACCT TACAAGCCGA CTGATTCGAT CCCGAAGCTA CGCTATCAAT TGATTCACTT GATGCGGGCC TGCAATGTGC AGATGTTGGT TCTCGATGAA ATGCATTCTC TTCTCACGGG AACTACAACG AAGCAGCGCG AGGTGATGAA CGCGCTCAAG CTGCTCTGCA ATGAACTGCG CATTCCGATC GTCGGTGTCG GTACACGAGA AGCGGTCCGC GTGCTGCATA CGGACCCTCA GCACGCAAGT CGTTTCGACG TCGCGTCATT GCCAGCGTGG AGCCCGGACA AAGAGTTTCA ACGCTTGCTC GCCAGCTTCG AACGAGTACT GCCGCTAAAG CACCCTTCCA GACTACATGC GCCCGAGCTG GCCAGCCGGC TGCATGCCAT TTCGGAAGGA AACATCGGCA ACCTTCATCG ACTGTTAGTG GCTTGTGCGA CGCAGGCCAT TCGCGCCGGC TCAGAGCAGA TTGATGTCGC CATTGTTGAG AAGAATCAAT GGATACGCCC CACACGGGGC ATCCGGGAGC TATTTGCGTG A
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Protein sequence | MTQYMHVHPD FLPIMALSGE ERIAAMDQPR WIGYPRAIEI LDLLQGLLTK PKRPRMPNLL IVGDSNNGKT TLIERFRELC GTSYVDGSGD PVRPVVIAEA PTSADERSLY VSVLERFWTP YKPTDSIPKL RYQLIHLMRA CNVQMLVLDE MHSLLTGTTT KQREVMNALK LLCNELRIPI VGVGTREAVR VLHTDPQHAS RFDVASLPAW SPDKEFQRLL ASFERVLPLK HPSRLHAPEL ASRLHAISEG NIGNLHRLLV ACATQAIRAG SEQIDVAIVE KNQWIRPTRG IRELFA
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