Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0201 |
Symbol | |
ID | 8017824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 210636 |
End bp | 211307 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644828982 |
Product | TnsA endonuclease |
Protein accession | YP_002980182 |
Protein GI | 241661822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00571286 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGCAGG TCCGAAAGAT CGGTCCGACA CGACGTAGTG TTTCTGGGGT CTATGCCTTT CGCGGTGAGC GATCGATCGA GTTCGAGTCG ACGCTTGAGC GAGACTTTCT GATGCGAGTG GAGTTTTCGC AGATGGTTGT CGATGTGGCT CCACAGCCGG TCGAGCTTCG CTATCGGGCT GACAACGGGC GTGAGTATCG ATACACCCCC GACTTTCTCG TTCGTTACCG CGCGGCGGAC TGCCCGTTTG GCGTGGGTCC GAAGCCGCTT CTGGTTGAAG TGAAGCCTCG GGAGAAGCTC CGAAAGCATT GGTGCGAAAT GCGTCCCAAA TTTAAGGCAG CGCTGCGCTA CGCACGCGAA CAAGGTTGGG ACTTTCGTAT TTATGACGAG TCTCGGATAC GCGATCAGGT TCTAGCGAAC ATCTTCTTCT TGCAAAGGTA TCTGCGATTG CAATTTCCGA CGGAGGATGT GCGCGCTGTG CTTGAGAACC TTAGCGCCAT GGGGCAAGCG CCCTTCCATT ACTTGGTTGG TCGCCACTTC TCTGGCATCG CGGACCGAGC TGTCGGGGTG TCGCTGTTGT GGCATCTGCT TTCGACCGGA TTAATGGAGT GCGATATGAC ACTGCCTTTG AACAACAACA CAGTGTTGTG GACACCGCAT CATGAGCGAT GA
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Protein sequence | MQQVRKIGPT RRSVSGVYAF RGERSIEFES TLERDFLMRV EFSQMVVDVA PQPVELRYRA DNGREYRYTP DFLVRYRAAD CPFGVGPKPL LVEVKPREKL RKHWCEMRPK FKAALRYARE QGWDFRIYDE SRIRDQVLAN IFFLQRYLRL QFPTEDVRAV LENLSAMGQA PFHYLVGRHF SGIADRAVGV SLLWHLLSTG LMECDMTLPL NNNTVLWTPH HER
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