Gene Rpic12D_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0197 
Symbol 
ID8017820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp207854 
End bp208369 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID644828979 
Producthypothetical protein 
Protein accessionYP_002980179 
Protein GI241661819 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00526353 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAACCC CGTCCGTCGC GCTGCGTGCC CTGCGCGGCG ACATCACCAC GCTGGACTGC 
GATGCCATCG TCAACGCTGC GAACAGCTCG CTGCTGGGCG GGGGCGGTGT CGATGGCGCG
ATCCACCGCG CGGCGGGGCC GGAATTGCTG GAGGCGTGCC GTGCACTCCA TGGCTGTCGG
ACCGGCGAAG CCAAACTCAC GCCGGGCTTC CAGCTGACGG CGCGCTACGT CATCCACACC
GTCGGACCCA TCTGGCGCGG CGGCCGGCAG GACGAGGCGG CGCTGTTGGC CGCGTGTTAT
CGCAACAGCC TGGAACTGGC GTGCAAATAC GAGGTGCGGA GCATCGCGTT TCCGTGCATC
AGCACCGGCA TCTATGGCTT CCCGCCGCAA TTGGCCGCGC CTATTGCAGT ACGTGCCGCC
CGCGAGCATG GCAGCCGCTT CGAGACAATC ACCTTTTGCT GCTTCTCGGC TGCGGATTTG
ATCCTGTACG AAGCCGCCCT CGGCAACAGA AAGTGA
 
Protein sequence
MPTPSVALRA LRGDITTLDC DAIVNAANSS LLGGGGVDGA IHRAAGPELL EACRALHGCR 
TGEAKLTPGF QLTARYVIHT VGPIWRGGRQ DEAALLAACY RNSLELACKY EVRSIAFPCI
STGIYGFPPQ LAAPIAVRAA REHGSRFETI TFCCFSAADL ILYEAALGNR K