Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0193 |
Symbol | |
ID | 8017816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 202896 |
End bp | 204908 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644828975 |
Product | histidine kinase |
Protein accession | YP_002980175 |
Protein GI | 241661815 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0541233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTCG TGAAGCACCT CGGCGACATG CCGACTGCCG GCACGGCGTT GGAAGGCATG GCATCACCCT CCGCCGCCCA GCTCCAGCCG ATGTCCGATC CCGATTTCTC CCTGACCAGC GCCTCCGGCC CGCGACGCGG CTTCTGGTGG CTGGTGGCGC TCGGGCTCGT GGTGGTAATG GCCGTGGTGT GCGCGACGAC GTTTGTGGTG GCGTGGAACC GGGGCCTCGC ACAGGCCCAG CAGGCCGCCG GCGGTCGGGT CGATCGCTAT GCCGCCAACC TCAAGAGCAC GCTCGACCGC TACGAATACC TGCCGGCGCT GGTGGCGCTG CATCCGTTCA TCCACGATCT GCTCGCCAAT CCGACATCCG CCAACGTCGA CCGCGCGAAC CGCTATCTGC GCGAAGTCAA CGATCGCGCG CACGCCACTG CCACCTACGT GATCGCCCCC AGCGGCAAGG CGCTGGCAGC ATCCAACTAC AACCAGCCCG ACAGCTTCGT CGGTGCCGAA TATCGGTTCC GGCCGTATTT CCAGCAGGCA GCGGAAGGCC ACGTCGGGCG CTTCTACGGC ATTGGCATTA CGCGTGAAGA GCCCGGCTAT TACATCTCCC AGCCGGTTAT GCAGGATGGC CGCGTGATCG GCGTGACGGT GGTCAAACTC AACCTCGAAT GGTTCGGCCG CGCCAGCCAC GACGCGTCGG AACCCGTGAT GGTGGCCGAC GAGAACGGCG TGATTTTCCT GTCGTCCGTG CCCGCGTGGC AGTACCGCAC GGTGGAACCT CTCACGTCCA AACTGCAGGC GCAGTTGGAG GCGACGCGCC AGTATTACCG CAAGCAGATC ACGCCGCTGC CGCTGCAGCC CGAGGCGCCG GCCTTCCTGC GATTGACCGG GCGATTGCCC GAAGGCGCAG AGCTGATTCG CGTTGGCGAG CGCACGAACG CGACGCGCTA TCTGCAGGTT TCGCGCGACC TGGTCGAGCC CGACTGGACG CTGATGTATC TCACGCCGGT GGAGCCGGTG ATGGGCGCCG CGCGCAGCGC CACCGTGGCG GCGGCGTTTG CCTTCGCCTT TGCATGCCTG CTGCTCTTCT ACTGGCGGCA GCGGCGCCTG CGCATGATGG AGATGCTGCG TAGCCGCCGC CTGCTCGAAG CCGCATATGA CCAGCTCGAA CGCCGTGTCG AAGACCGCAC CGCCGACCTG ATGGCCACCA ACGAACAACT GCAGCACGAG ATCGTCGACC GCACGCGTGC CGAGGCCGAA CTGCGCGCCA CGCAGGATGA ACTCGTGCAG GCCAGCAAGC TTGCCGCGCT GGGCCAGATG GCTGCCGGCA TCACGCACGA ACTCAACCAG CCGCTGGCTG CGCTGCGCAC GTTCTCCGAC AACACGCGCA TCCTCCTTGA GCGTGGCCAG CACGGCGCCG CCACGGATAA CCTGCAGGCG ATTGCCGACC TGACCGAGCG CATGGGCAAG ATCACCGCGC AGCTCAAGCT GTTTGCGGGC CGCTCGCGGC GCAAGGTGGT GGATGTGCAG GTGCGCGTGG CGCTGGATCA CACGCTCGCG CTGCTGCGTC CGCGCTTGGG CGATGTGGCG CTCGAACTGC ACTGGCGCAT CCCCGAGACA GAGGCCGTGG TGCGCGCGGA CGAACTGAAG CTGGAGCAAG TGCTGATCAA TCTGATCGGC AACGCGCTCG ATGCGATCAG CGCCAATGAG CCCGCGCGCG CCGGACGCAT CGACATCACC ATCGGCCCGA TCGAAGGAGC GCCATCGAAT CAACTGACCA TCGCTGTGCG CGACAACGGC CCTGGCATTC AGCCCGACGC CATGCCGCAT TTGTTCGAGC CGTTCTTCAC CACCAAGGAG ATCGGACAAG GGCTGGGCCT TGGGCTGGCG ATTTCCACCA GCATTGCGCG GGACTTTGGC GGCTCGCTGT CGGCTGCGAA CGTGCCGGGC GGTGGCGCGC AGTTTACGCT GACATTGGTA CGCGCTGACG TCACCTCCGC GGCAACCACC TGA
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Protein sequence | MHFVKHLGDM PTAGTALEGM ASPSAAQLQP MSDPDFSLTS ASGPRRGFWW LVALGLVVVM AVVCATTFVV AWNRGLAQAQ QAAGGRVDRY AANLKSTLDR YEYLPALVAL HPFIHDLLAN PTSANVDRAN RYLREVNDRA HATATYVIAP SGKALAASNY NQPDSFVGAE YRFRPYFQQA AEGHVGRFYG IGITREEPGY YISQPVMQDG RVIGVTVVKL NLEWFGRASH DASEPVMVAD ENGVIFLSSV PAWQYRTVEP LTSKLQAQLE ATRQYYRKQI TPLPLQPEAP AFLRLTGRLP EGAELIRVGE RTNATRYLQV SRDLVEPDWT LMYLTPVEPV MGAARSATVA AAFAFAFACL LLFYWRQRRL RMMEMLRSRR LLEAAYDQLE RRVEDRTADL MATNEQLQHE IVDRTRAEAE LRATQDELVQ ASKLAALGQM AAGITHELNQ PLAALRTFSD NTRILLERGQ HGAATDNLQA IADLTERMGK ITAQLKLFAG RSRRKVVDVQ VRVALDHTLA LLRPRLGDVA LELHWRIPET EAVVRADELK LEQVLINLIG NALDAISANE PARAGRIDIT IGPIEGAPSN QLTIAVRDNG PGIQPDAMPH LFEPFFTTKE IGQGLGLGLA ISTSIARDFG GSLSAANVPG GGAQFTLTLV RADVTSAATT
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