Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0185 |
Symbol | |
ID | 8017808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 196033 |
End bp | 196722 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644828967 |
Product | lipoate-protein ligase B |
Protein accession | YP_002980167 |
Protein GI | 241661807 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.234452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.901872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCGA TTGACATCGT CGAACGCGGC CTGCAGGACT ACGCCGCCTG CTTCGACGAA ATGCAGACCT TTACCGCACA GCGGGGCCCC GATACGCCCG ACACGATCTG GCTGGTCGAA CACCCGCCGG TGTTCACGCT CGGCCTGGCC GGTGATCCCG CGCATCTGTT GGCCCCCGGC AACATCCCGC TGGTGAAAGT CGACCGTGGC GGTCAGATCA CTTATCACGG CCCCGGCCAA GTCGTTGCCT ACCTTTTGCT GGATTTGCGC CGCCGTGGGC TGTTCGTGAA AGCGCTGGTC GACGCGATCG AGGCGGCCGT CATCGAGACG CTCGCCACGT ATAATGTTGC CTCCGAACGT AAGGCTGGCG CCCCCGGCAT CTACCTGTCG AGCGGGCCGC ATGCTGGTGC CAAGATCGCC GCGCTGGGCC TGAAGATCCG CAACGGCTGC AGCTACCACG GCGTGAGCTT GAACCTGGCG ATGGACCTGT CGCCCTTCAC GCAGATCAAC CCGTGTGGCT ATGCCGGCCT GGAAACCGTC GATATGGTGA CCGCCGGCGC CCGTGATGCG TCCGGACGCG CCGTCGATGC GAACGACTGG CAAACCGTTT CCCGCGACCT GGCCAATGCG CTGGTCGCTC AATTGCAGCA ACGCGCGCAA GCGCACCCCG CCGAGGCCGC TACCGCATAG
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Protein sequence | MIPIDIVERG LQDYAACFDE MQTFTAQRGP DTPDTIWLVE HPPVFTLGLA GDPAHLLAPG NIPLVKVDRG GQITYHGPGQ VVAYLLLDLR RRGLFVKALV DAIEAAVIET LATYNVASER KAGAPGIYLS SGPHAGAKIA ALGLKIRNGC SYHGVSLNLA MDLSPFTQIN PCGYAGLETV DMVTAGARDA SGRAVDANDW QTVSRDLANA LVAQLQQRAQ AHPAEAATA
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