Gene Rpic12D_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0185 
Symbol 
ID8017808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp196033 
End bp196722 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID644828967 
Productlipoate-protein ligase B 
Protein accessionYP_002980167 
Protein GI241661807 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.234452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.901872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCGA TTGACATCGT CGAACGCGGC CTGCAGGACT ACGCCGCCTG CTTCGACGAA 
ATGCAGACCT TTACCGCACA GCGGGGCCCC GATACGCCCG ACACGATCTG GCTGGTCGAA
CACCCGCCGG TGTTCACGCT CGGCCTGGCC GGTGATCCCG CGCATCTGTT GGCCCCCGGC
AACATCCCGC TGGTGAAAGT CGACCGTGGC GGTCAGATCA CTTATCACGG CCCCGGCCAA
GTCGTTGCCT ACCTTTTGCT GGATTTGCGC CGCCGTGGGC TGTTCGTGAA AGCGCTGGTC
GACGCGATCG AGGCGGCCGT CATCGAGACG CTCGCCACGT ATAATGTTGC CTCCGAACGT
AAGGCTGGCG CCCCCGGCAT CTACCTGTCG AGCGGGCCGC ATGCTGGTGC CAAGATCGCC
GCGCTGGGCC TGAAGATCCG CAACGGCTGC AGCTACCACG GCGTGAGCTT GAACCTGGCG
ATGGACCTGT CGCCCTTCAC GCAGATCAAC CCGTGTGGCT ATGCCGGCCT GGAAACCGTC
GATATGGTGA CCGCCGGCGC CCGTGATGCG TCCGGACGCG CCGTCGATGC GAACGACTGG
CAAACCGTTT CCCGCGACCT GGCCAATGCG CTGGTCGCTC AATTGCAGCA ACGCGCGCAA
GCGCACCCCG CCGAGGCCGC TACCGCATAG
 
Protein sequence
MIPIDIVERG LQDYAACFDE MQTFTAQRGP DTPDTIWLVE HPPVFTLGLA GDPAHLLAPG 
NIPLVKVDRG GQITYHGPGQ VVAYLLLDLR RRGLFVKALV DAIEAAVIET LATYNVASER
KAGAPGIYLS SGPHAGAKIA ALGLKIRNGC SYHGVSLNLA MDLSPFTQIN PCGYAGLETV
DMVTAGARDA SGRAVDANDW QTVSRDLANA LVAQLQQRAQ AHPAEAATA