| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0182 |
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| Symbol | |
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| ID | 8017805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 191966 |
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| End bp | 194068 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644828964 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_002980164 |
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| Protein GI | 241661804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCA ACAGTCGCCG TGGTTTTCTC CGTTCCGCTG CCCAACTGGC TGCTGCCTCC
GCAGCCATGG GCGCGGTGCC CGAAGGCATT CGCCAGGCGC TGGCGATTCC CGCCCATAAC
GCGCACCGCA ACATCGAGGA CGTGCAGCAC ATCGTGATCC TCATGCAGGA AAACCGCTCG
TTCGACCATT ACTTCGGCAC GCTCCGCGGC GTGCGTGGGT ATGGCGATAC GCGCACCGTC
ACGCTGCCGA GCGGCAAGAG CGTGTGGCAT CAGCCGGTGG CCGGTGGCGT GGGCGAAGTG
CTGCCGTTCC GCCCGAGTGC GCCCGATCTG GGCCTGCAGT TCCTGCAAGA CTTGCCGCAC
GGCTGGAACG ACACGCACCT TGCCGTCAAC GGCGGCCGCT ATGACGGCTG GGTCCCGCAC
AAGGGCACCA CGACGATGGC GTATCTCACA CGCCAGGACA TTCCGTTCCA CTACGCCCTG
GCCGACGCCT TCACCATCTG CGACGCCTAT CACTGCGCCA CGCCCACGTC GACCGACCCG
AACCGCTACT ACATGTGGAC CGGCTATGTC GGTAACGACA ACGTCGGCGG CGGCCCGGTA
ATCGACAACG CAGAAGCCGG CTACGGCTGG TCGACGTATC CGGAAGTGCT GGAGGCCGCC
GGAATTTCGT GGAAGATCTA TCAGGACATC GGTACCGGGC TGGACGCCGC AGGTTCCTGG
GGCTGGACGA GCGACGCCTA CATCGGCAAC TACGGCGACA ACTCGCTGCT GTACTTCAAG
CAATATCAGA ACGCGCAGCC TGGCAACCCG CTGTACGACA AGGCGCGCAC CGGCACCAAA
GCAGCGGCCG GAGAGGGCTA CTTCGACATC TTGAAGCGCG ACGTGCAGAA CGGCACGCTG
CCGCAGGTAT CGTGGATTGC CGCGCCGGAA GCGTTCTCCG AGCACCCGAA CTGGCCGGCC
AACTACGGCG CCTGGTACAT CGATCAGGTC TTGCAGGTGC TGACCTCCAA CCCCGAGGTG
TGGAGCAAGA CCGCGGTGTT CATCACCTAC GACGAGAACG ACGGCTTCTT CGATCACCTC
GTCCCACCGT TCGCCGCGTC GGGCAGCAAT GGACTGTCGA CGGTCGATAC CACGGGCGAA
TACTTCCCGG GCAACAGCAC GTACAGTGCC GGCAGCTACG GCCTGGGCCA GCGCGTGCCG
ATGCTTGTGG TATCGCCGTG GTCAAAGGGC GGCTACGTGT GCTCCGAAAC GTTCGACCAT
ACGTCGATCA TTCGTTTCAT CGAGCAGCGC TTCAAGCGCA CGCACGGCGT GCGCTCGCCG
AACATCTCGA AGTGGCGTCG CGCCGCGTGC GGTGATCTGA CGTCGGCGTT CAACTTCGCC
ACGCCCAACG AGATGGTGCC TGCATTGCCG AGCACCGCAG CCTACGTGCC GAAGGACAAG
CTGCGCCACG CCAGCTACGT GCCGCTGCCC CCGCTGGTGC AGGCCGTGCC GAAGCAGGAA
GCGGGCGTGC GAGCGTCGCG TGCGCTGCCG TACGAACTTT TCGTGCGCGG GCGCCAGGAC
GAAGCCGCCG GCAAGTTCCA GCTGGAATTC GTGAACACCG GGGACGTGGG GGCAGCCTTC
CTCGTCTACA CCGCCGGCAG CACGGATGCA CCGCGCACCT ACACGGTCGA GGCAGGCAAG
CGGCTGTCGG ACAAGCTGGC CGTGAACGCA GGCGGCGCCT ACGATTTCAC GGTGCACGGC
CCGAACGGCT TCCTGCGCCG CTTTGTCGGC AAGCTCACGC TGTCGGGCCT GCTGCGTCCG
CACGGTCACG CGCTGGAAGT GAAGGAAGGC TACGACGTGG CCAACGGCAA CCTGCAGCTG
CGCCTCATCA ATCACGGCCG TGCGCCGACC GTCTTCACCA TCAAGAGCGC TTACACGGGC
GAAAGCGTGC AACGCGAAGT GCGCGGCGGT GACGATGCGT CGGTGTACCT CGACTTGCGC
AGCCACCACG CCTGGTACGA CCTGACCGTC ACGGCCAGCA CGGATGCCGG TTTCGCGCGT
CGCCTTGCCG GCCACGTTGA AACCGGCCGA GTCAGCGCGT CCGATCCGGC GCTGAGCGCA
TAA
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| Protein sequence | MTSNSRRGFL RSAAQLAAAS AAMGAVPEGI RQALAIPAHN AHRNIEDVQH IVILMQENRS
FDHYFGTLRG VRGYGDTRTV TLPSGKSVWH QPVAGGVGEV LPFRPSAPDL GLQFLQDLPH
GWNDTHLAVN GGRYDGWVPH KGTTTMAYLT RQDIPFHYAL ADAFTICDAY HCATPTSTDP
NRYYMWTGYV GNDNVGGGPV IDNAEAGYGW STYPEVLEAA GISWKIYQDI GTGLDAAGSW
GWTSDAYIGN YGDNSLLYFK QYQNAQPGNP LYDKARTGTK AAAGEGYFDI LKRDVQNGTL
PQVSWIAAPE AFSEHPNWPA NYGAWYIDQV LQVLTSNPEV WSKTAVFITY DENDGFFDHL
VPPFAASGSN GLSTVDTTGE YFPGNSTYSA GSYGLGQRVP MLVVSPWSKG GYVCSETFDH
TSIIRFIEQR FKRTHGVRSP NISKWRRAAC GDLTSAFNFA TPNEMVPALP STAAYVPKDK
LRHASYVPLP PLVQAVPKQE AGVRASRALP YELFVRGRQD EAAGKFQLEF VNTGDVGAAF
LVYTAGSTDA PRTYTVEAGK RLSDKLAVNA GGAYDFTVHG PNGFLRRFVG KLTLSGLLRP
HGHALEVKEG YDVANGNLQL RLINHGRAPT VFTIKSAYTG ESVQREVRGG DDASVYLDLR
SHHAWYDLTV TASTDAGFAR RLAGHVETGR VSASDPALSA
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