Gene Rpic12D_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0174 
Symbol 
ID8017797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp182148 
End bp183029 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content71% 
IMG OID644828956 
Productbiotin--protein ligase 
Protein accessionYP_002980156 
Protein GI241661796 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTTG CAGAACCCTC CGCGCGGTGG CGCCTTGCGC GCGAGCGTAT CCAGCCCAGC 
GGCCTGGCTG CCGGCTGGCC TGTCGATGTG GTCGAGGCCA CCGGCTCCAC CAACGCCGAT
CTGATGGCCG CCGTGCGTGA TGCCGCCTGG CCTGCCAACC CTGCGATGCC TGCTCCTGCC
GGCACGGCGC CGCTGCTGGG CGCCCGGGTG CTGGCCGCCC AGCGGCAGAC TGCAGGACGC
GGCCGACAGG GCCGCCCGTG GGATGGTGAC CACGGCCTGA CGTTTTCCAT CGCCTGTGCC
TTTGCGGGTG AGCCCGCGCA GCTCGGCGGC CTGAGCCTGG CCGTGGGTGT GGCCGTGGCT
GAGGCCGTGG CTGCGTACGC GCAAGCCCAC GGTGGCAGCG GACAGGCCCT CGGCCTCAAG
TGGCCCAACG ATGTGCAGAT CGCCGGGCGC AAGCTGGCCG GCATCCTCGT CGAGACCGTG
CGGAAGGAAG CGGGTCAGAC CTGGGCCGTC ATCGGCATCG GCCTGAACCT GGAACGGCCG
CGCGTGCTGG AATCCACGCT GGGCCGCGGG CTGTCGGGCG TGGAAGAACT CGTGGATGCG
CCAGAGCCGA ATGCCGTATT CTCGGCGCTG CTCACCTCGC TGGGGGAGCA TCTGCAGCAC
TTCGGCGCGC AGGGCTTGGC GCCGTTCGTT GCGCCGTTTG CTGCCCGCGA TGCCTTTGCC
GGCGAACGGG TGCGCCTGTG GCAGGACGGC ACCGTGGTGC TGGAAGGCGT GGCGCATGGC
ATCGACGCGC AGGGCCGCCT GGCGATTGAG TCGGGCGGAC GTGTGCAGTG GGTGCACAGC
GGCGAGGTCT CCTTGCGCAG CGCAGAGGCG GACCAGCCAT GA
 
Protein sequence
MSLAEPSARW RLARERIQPS GLAAGWPVDV VEATGSTNAD LMAAVRDAAW PANPAMPAPA 
GTAPLLGARV LAAQRQTAGR GRQGRPWDGD HGLTFSIACA FAGEPAQLGG LSLAVGVAVA
EAVAAYAQAH GGSGQALGLK WPNDVQIAGR KLAGILVETV RKEAGQTWAV IGIGLNLERP
RVLESTLGRG LSGVEELVDA PEPNAVFSAL LTSLGEHLQH FGAQGLAPFV APFAARDAFA
GERVRLWQDG TVVLEGVAHG IDAQGRLAIE SGGRVQWVHS GEVSLRSAEA DQP