Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0174 |
Symbol | |
ID | 8017797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 182148 |
End bp | 183029 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644828956 |
Product | biotin--protein ligase |
Protein accession | YP_002980156 |
Protein GI | 241661796 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCTTG CAGAACCCTC CGCGCGGTGG CGCCTTGCGC GCGAGCGTAT CCAGCCCAGC GGCCTGGCTG CCGGCTGGCC TGTCGATGTG GTCGAGGCCA CCGGCTCCAC CAACGCCGAT CTGATGGCCG CCGTGCGTGA TGCCGCCTGG CCTGCCAACC CTGCGATGCC TGCTCCTGCC GGCACGGCGC CGCTGCTGGG CGCCCGGGTG CTGGCCGCCC AGCGGCAGAC TGCAGGACGC GGCCGACAGG GCCGCCCGTG GGATGGTGAC CACGGCCTGA CGTTTTCCAT CGCCTGTGCC TTTGCGGGTG AGCCCGCGCA GCTCGGCGGC CTGAGCCTGG CCGTGGGTGT GGCCGTGGCT GAGGCCGTGG CTGCGTACGC GCAAGCCCAC GGTGGCAGCG GACAGGCCCT CGGCCTCAAG TGGCCCAACG ATGTGCAGAT CGCCGGGCGC AAGCTGGCCG GCATCCTCGT CGAGACCGTG CGGAAGGAAG CGGGTCAGAC CTGGGCCGTC ATCGGCATCG GCCTGAACCT GGAACGGCCG CGCGTGCTGG AATCCACGCT GGGCCGCGGG CTGTCGGGCG TGGAAGAACT CGTGGATGCG CCAGAGCCGA ATGCCGTATT CTCGGCGCTG CTCACCTCGC TGGGGGAGCA TCTGCAGCAC TTCGGCGCGC AGGGCTTGGC GCCGTTCGTT GCGCCGTTTG CTGCCCGCGA TGCCTTTGCC GGCGAACGGG TGCGCCTGTG GCAGGACGGC ACCGTGGTGC TGGAAGGCGT GGCGCATGGC ATCGACGCGC AGGGCCGCCT GGCGATTGAG TCGGGCGGAC GTGTGCAGTG GGTGCACAGC GGCGAGGTCT CCTTGCGCAG CGCAGAGGCG GACCAGCCAT GA
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Protein sequence | MSLAEPSARW RLARERIQPS GLAAGWPVDV VEATGSTNAD LMAAVRDAAW PANPAMPAPA GTAPLLGARV LAAQRQTAGR GRQGRPWDGD HGLTFSIACA FAGEPAQLGG LSLAVGVAVA EAVAAYAQAH GGSGQALGLK WPNDVQIAGR KLAGILVETV RKEAGQTWAV IGIGLNLERP RVLESTLGRG LSGVEELVDA PEPNAVFSAL LTSLGEHLQH FGAQGLAPFV APFAARDAFA GERVRLWQDG TVVLEGVAHG IDAQGRLAIE SGGRVQWVHS GEVSLRSAEA DQP
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