Gene Rpic12D_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0173 
Symbol 
ID8017796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp181270 
End bp182151 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content71% 
IMG OID644828955 
Productpantothenate kinase 
Protein accessionYP_002980155 
Protein GI241661795 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGCC TGAAGGTGTC GGCCGCGCAC GCTGCCCCCG CCCGTCCGCT GTTGCTGATC 
GACGCGGGAA ACACACGCAT CAAATGGGCG TGGATTGCCG GGGGTGCCGA TGCCGAACTC
GCCCTGCCGG AGGAGCCCGG CGGCACGCCC TGGCAGCATG CCGGCGCCCG CGCGCATGAT
CGATTGGCGG AACTGGTGGA AGACTGGCGC GATTGCCACG CCTCCGGCGT TGCGCCGCCC
GAAGTATGGA TCAGCGCGGT GGCCGGCCCG GCGCTGCGCG ATGCACTCAC CGCCCGCATC
GCCCGCGTGT TCGATGGGGC GCGCGTGCGC ATTGCGGCAT CGGAAGACGC CACCGCCGGC
CTGCGCAATG GGTATCGCGA CCCCACGCAA CTCGGCACTG ACCGATGGGT CGGCGCGGTC
GGCGCCCGCC ATCTGTGGCC CGACACGGCC TTGTTGCTCG TGACGGCGGG CACCGCCACC
ACGCTCGACA TCGTCACGCC CGGCGGCCTG TTTGCCGGTG GCCTGATCCT GCCCGGTCTC
ACGTTGATGA TGCGCGCGCT GTCGCGCAAC ACCGCGCAGT TGCCCGAAGT GGACGTCAGC
TACCTGAGCG CGGGCGACGT TGTGGCGCCG CCCTGGGCCG ACAATACGCA GGACGCGATC
GCGCTGGGCT GCGTCATCGC CCAGGCAGGC GCAATTGCAC AGACCTGGAT GGCGCTGCAG
AAGCAACATC CCGGGCCGGC CCGCTGCGTG CTGAGCGGCG GCGCGCGCGC TGCGCTGGGA
CCGCATCTGC GCATGCCCTT CCAGATGCAC GATAATCTCG TGCTGCTTGG CCTGCAGGTG
CTGGCGCGTG CAAGCCGGGA CGGCGCCGCG ACGCTGGCCT AG
 
Protein sequence
MTRLKVSAAH AAPARPLLLI DAGNTRIKWA WIAGGADAEL ALPEEPGGTP WQHAGARAHD 
RLAELVEDWR DCHASGVAPP EVWISAVAGP ALRDALTARI ARVFDGARVR IAASEDATAG
LRNGYRDPTQ LGTDRWVGAV GARHLWPDTA LLLVTAGTAT TLDIVTPGGL FAGGLILPGL
TLMMRALSRN TAQLPEVDVS YLSAGDVVAP PWADNTQDAI ALGCVIAQAG AIAQTWMALQ
KQHPGPARCV LSGGARAALG PHLRMPFQMH DNLVLLGLQV LARASRDGAA TLA