Gene Rpic12D_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0164 
Symbol 
ID8017787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp172585 
End bp173589 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID644828946 
ProductLuciferase-like monooxygenase 
Protein accessionYP_002980146 
Protein GI241661786 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGT CGATCTTTTC CGTGCAGGAC CATTACCCCG ACCGGCCCCG CAGTCTGCCG 
CAACTCTACG CAGACGTCAT CGCCCAGGCG CGCCACGCCG AAGCGCTCGG CTACGACACC
TTCTGGGTGG CCGAGCATCA CTTTCACGAG TACGGCGCCG TTCCCAACCC TGCGGTCTTT
CTCTCGCATC TGGCCGCGCA GACGCAGCGG CTGCGGCTGG GCACCGCCAT TTCGATCCTC
ACCTTTCATC ATCCGGCCAC GGTGGCAGAG AACTACGCGA TGATCGATGC GCTTTCGGGC
GGACGGCTGT CGCTGGGCGT GGGCTCCGGC TACCTCAAGC ACGAGTTCGA AGGCTACGAC
GTCGACCCCG CCGTCAAGCG CGAGCGCTTT GACGAAGCGC TGATGCTTGT CGAGCGCTTG
CTTGCAGGTG AGCGTGTGCA TCACGCGGGT CAGTTCCACA CGCTGCGCGA CGTGCGCCTC
AACGTGCTGC CGGTGCAGGC TCGCGTGCCG ATCCACGTGG CAATCCTGCG GCGCGAGGCG
GCGTATCACA TTGGCCGGCA GGGGCGGCGC ATGCTGTTCG TGCCGTATGC CTCGGTCGAC
AGCTTCAATG ACATCCGCGC GTTGATGGAC GACTACCGGC GCGGCCTGGC CGAAGCAGGC
ATTGCCGACA CGCGCGGCAT GGCGGCCGTC GCGCTGCACA CGCATGTGGG CCCGACCGAA
GCCGCCGTGC GTGCAACGGC CGCCGACCCG TTCGACCTGT ACGTTGCCAC GCGTCTCTAT
GCGCGCCGCC AGACGTACGA CGATGTGCTC GCCAGCGGCC TGTCGTTGTT CGGCACGCCC
GATGCGGTGG CCGAGAAGCT CGCGCGGCTG TCCGACATGG GCGTCGATCA CGTGATGGCG
CTGCACAACT TCGGGTTGAT GCCGCAATCG GCTGTGCTCG AATCGATGCG CGCGTTCGTG
GAGGATGCGC TGCCGCGCGC CCGCATCACG GCGCTCGCTG CCTGA
 
Protein sequence
MKLSIFSVQD HYPDRPRSLP QLYADVIAQA RHAEALGYDT FWVAEHHFHE YGAVPNPAVF 
LSHLAAQTQR LRLGTAISIL TFHHPATVAE NYAMIDALSG GRLSLGVGSG YLKHEFEGYD
VDPAVKRERF DEALMLVERL LAGERVHHAG QFHTLRDVRL NVLPVQARVP IHVAILRREA
AYHIGRQGRR MLFVPYASVD SFNDIRALMD DYRRGLAEAG IADTRGMAAV ALHTHVGPTE
AAVRATAADP FDLYVATRLY ARRQTYDDVL ASGLSLFGTP DAVAEKLARL SDMGVDHVMA
LHNFGLMPQS AVLESMRAFV EDALPRARIT ALAA