Gene Rpic12D_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0163 
Symbol 
ID8017786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp171570 
End bp172478 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID644828945 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002980145 
Protein GI241661785 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG ACGCTCCCCT GGCGCAGGAC ACATCGCCCG ACGAACTGCC CGCAGAAGAC 
GCCACGCCTG AACGCACCAG CGCAGGCATC CAGTCCGCCG AGATCGCGCT GAGCGTGCTT
TCGGCGATGG CGCATGCCGG TGGCGCACAC GCCGTCTCTG AACTGGGCCG CCAGCTAGGC
ATGCCGCGCG CGAAGGTGCA CCGTTATCTG GTGTCGCTGG AACGCATGGG TTTTGTCGAG
CAGGATCCAG CCTCGGCCCG TTATCGGCTC GGCACACAGG CCTTGCAGGT GGGGCTGTCG
GCGCTGTCCG ACGTGGATTT CGTGCGCGAA GGCAGCAACC TGCTGCCCAA GCTGGCCGAA
CGGCTGAACG AAAGCGTGTT TCTGTCGATC TGGACCGCGC GCGGGCCCGT CATCGTGCGC
TGGGAAGACA GCGGCCGGCC GGTGGCGGTC AATGTGCGGG TGGGCTCGGT CATGCCCCTG
CTGAATTCAG CCACGGGCCA GGCGTGCGCG GCGTGGGTGC CTGAAATCCA GATCGTCTCG
CTCATCGATC GTGAATTGCG CGGGCCGGGC GCCGGCAAGG CGGGCCTGAC GGACTGGCTG
AACTGCCGCG CGCGCTGGCA GGCGGTGCGG CAGGAGGGCG TCGCGCGCAT CGGCGGGACA
TTGGTGCACG GCATCGATTC AGTGGCCGTG CCGGTGCTCG ATTCCCAGGG CAAGCTGGCC
GGGGCGATCA CGGCGCTGGG CTTGTCCAGC GTGTTTGATT CGAGCCTGGA AGGGCCCGCC
GCGCGGCTGT TGCGCGAGGC CGGTCGGACG CTGTCGCTGC GCCTGGGGTA TCACGGGCAG
GCCCTGACGG CTGGTGCCGC TGCGCCAAAA CGGGGGCGCC GTCCGCGGAC GGCGCCCGAA
TCCGCATAA
 
Protein sequence
MPIDAPLAQD TSPDELPAED ATPERTSAGI QSAEIALSVL SAMAHAGGAH AVSELGRQLG 
MPRAKVHRYL VSLERMGFVE QDPASARYRL GTQALQVGLS ALSDVDFVRE GSNLLPKLAE
RLNESVFLSI WTARGPVIVR WEDSGRPVAV NVRVGSVMPL LNSATGQACA AWVPEIQIVS
LIDRELRGPG AGKAGLTDWL NCRARWQAVR QEGVARIGGT LVHGIDSVAV PVLDSQGKLA
GAITALGLSS VFDSSLEGPA ARLLREAGRT LSLRLGYHGQ ALTAGAAAPK RGRRPRTAPE
SA