Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0163 |
Symbol | |
ID | 8017786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 171570 |
End bp | 172478 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644828945 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002980145 |
Protein GI | 241661785 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATCG ACGCTCCCCT GGCGCAGGAC ACATCGCCCG ACGAACTGCC CGCAGAAGAC GCCACGCCTG AACGCACCAG CGCAGGCATC CAGTCCGCCG AGATCGCGCT GAGCGTGCTT TCGGCGATGG CGCATGCCGG TGGCGCACAC GCCGTCTCTG AACTGGGCCG CCAGCTAGGC ATGCCGCGCG CGAAGGTGCA CCGTTATCTG GTGTCGCTGG AACGCATGGG TTTTGTCGAG CAGGATCCAG CCTCGGCCCG TTATCGGCTC GGCACACAGG CCTTGCAGGT GGGGCTGTCG GCGCTGTCCG ACGTGGATTT CGTGCGCGAA GGCAGCAACC TGCTGCCCAA GCTGGCCGAA CGGCTGAACG AAAGCGTGTT TCTGTCGATC TGGACCGCGC GCGGGCCCGT CATCGTGCGC TGGGAAGACA GCGGCCGGCC GGTGGCGGTC AATGTGCGGG TGGGCTCGGT CATGCCCCTG CTGAATTCAG CCACGGGCCA GGCGTGCGCG GCGTGGGTGC CTGAAATCCA GATCGTCTCG CTCATCGATC GTGAATTGCG CGGGCCGGGC GCCGGCAAGG CGGGCCTGAC GGACTGGCTG AACTGCCGCG CGCGCTGGCA GGCGGTGCGG CAGGAGGGCG TCGCGCGCAT CGGCGGGACA TTGGTGCACG GCATCGATTC AGTGGCCGTG CCGGTGCTCG ATTCCCAGGG CAAGCTGGCC GGGGCGATCA CGGCGCTGGG CTTGTCCAGC GTGTTTGATT CGAGCCTGGA AGGGCCCGCC GCGCGGCTGT TGCGCGAGGC CGGTCGGACG CTGTCGCTGC GCCTGGGGTA TCACGGGCAG GCCCTGACGG CTGGTGCCGC TGCGCCAAAA CGGGGGCGCC GTCCGCGGAC GGCGCCCGAA TCCGCATAA
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Protein sequence | MPIDAPLAQD TSPDELPAED ATPERTSAGI QSAEIALSVL SAMAHAGGAH AVSELGRQLG MPRAKVHRYL VSLERMGFVE QDPASARYRL GTQALQVGLS ALSDVDFVRE GSNLLPKLAE RLNESVFLSI WTARGPVIVR WEDSGRPVAV NVRVGSVMPL LNSATGQACA AWVPEIQIVS LIDRELRGPG AGKAGLTDWL NCRARWQAVR QEGVARIGGT LVHGIDSVAV PVLDSQGKLA GAITALGLSS VFDSSLEGPA ARLLREAGRT LSLRLGYHGQ ALTAGAAAPK RGRRPRTAPE SA
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