Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0141 |
Symbol | |
ID | 8017764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 151459 |
End bp | 152304 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644828923 |
Product | hypothetical protein |
Protein accession | YP_002980123 |
Protein GI | 241661763 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.40714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTACA CCGATGCGGC TGGGCTCGCC CACGCCCCTG TCGACACCAC ACCGCGCATC GCCAGCCTGG TCCCTTCGAT TACCGATCTG CTGTTCTCGC TCGACCTCGG CGATCAGCTC GTCGCCCGCA CCGGCTTCTG CATCCACCCG CGCGAAGCGG TGCGCAACGT ACCGAAGGTC GGTGGCACCA AGACCGTCAA ACTGGACAAG TTGCGCGAGC TGGCGCCCAC GCACGTCATC GTGAACATTG ACGAGAACAC ACGCCCGACC GTCGACAGGC TGCGCGAGTT CATCCCGCAC ATCATCGTCA CCCATCCTTG CTCGCCCGAA GACAATCTCG CGCTATACCA GCTGCTGGGC GGCATCTTCC GCCGCGAGGC GCAGGCACAA AAGCTGGCGG ACGCGCTCAC GCAGGAGCTG GAGGCGCTGC GCGGCCGCCA CTTCCTGCCG CACCGCGTGC TGTACGCCAT CTGGCAAGAC CCGTGGATGA CGGTGTCGCG CGACACGTAC ATCTCGCGCA TGCTCAAACT CGTCAACTGC CATACGTGGC CGGACGACCC TGCGCCCGTG CAATGCGGCA CCGACAAGAG CGGCGATTGT GCCCGCCCCA ACCGTCCCGA CACGCGCTAC CCGACGTTCC GCTGGAGCAA TGATGTCGTG CGCAACATCG ACTGCGTGCT GCTCTCCACC GAGCCTTACA GCTTTACCGA AGAGCACGTC GATGCGCTGG AAAAACAGAT CGGCAAGCCG GTCTACCTCG TGGATGGCGA AATGGTGTCG TGGTACGGCA GCCGCGCGAT TGATGGCGTG CGGTATCTGG GGCAATTTGC GAAGACGCTG CGTTAG
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Protein sequence | MTYTDAAGLA HAPVDTTPRI ASLVPSITDL LFSLDLGDQL VARTGFCIHP REAVRNVPKV GGTKTVKLDK LRELAPTHVI VNIDENTRPT VDRLREFIPH IIVTHPCSPE DNLALYQLLG GIFRREAQAQ KLADALTQEL EALRGRHFLP HRVLYAIWQD PWMTVSRDTY ISRMLKLVNC HTWPDDPAPV QCGTDKSGDC ARPNRPDTRY PTFRWSNDVV RNIDCVLLST EPYSFTEEHV DALEKQIGKP VYLVDGEMVS WYGSRAIDGV RYLGQFAKTL R
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