Gene Rpic12D_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0141 
Symbol 
ID8017764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp151459 
End bp152304 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID644828923 
Producthypothetical protein 
Protein accessionYP_002980123 
Protein GI241661763 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.40714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACA CCGATGCGGC TGGGCTCGCC CACGCCCCTG TCGACACCAC ACCGCGCATC 
GCCAGCCTGG TCCCTTCGAT TACCGATCTG CTGTTCTCGC TCGACCTCGG CGATCAGCTC
GTCGCCCGCA CCGGCTTCTG CATCCACCCG CGCGAAGCGG TGCGCAACGT ACCGAAGGTC
GGTGGCACCA AGACCGTCAA ACTGGACAAG TTGCGCGAGC TGGCGCCCAC GCACGTCATC
GTGAACATTG ACGAGAACAC ACGCCCGACC GTCGACAGGC TGCGCGAGTT CATCCCGCAC
ATCATCGTCA CCCATCCTTG CTCGCCCGAA GACAATCTCG CGCTATACCA GCTGCTGGGC
GGCATCTTCC GCCGCGAGGC GCAGGCACAA AAGCTGGCGG ACGCGCTCAC GCAGGAGCTG
GAGGCGCTGC GCGGCCGCCA CTTCCTGCCG CACCGCGTGC TGTACGCCAT CTGGCAAGAC
CCGTGGATGA CGGTGTCGCG CGACACGTAC ATCTCGCGCA TGCTCAAACT CGTCAACTGC
CATACGTGGC CGGACGACCC TGCGCCCGTG CAATGCGGCA CCGACAAGAG CGGCGATTGT
GCCCGCCCCA ACCGTCCCGA CACGCGCTAC CCGACGTTCC GCTGGAGCAA TGATGTCGTG
CGCAACATCG ACTGCGTGCT GCTCTCCACC GAGCCTTACA GCTTTACCGA AGAGCACGTC
GATGCGCTGG AAAAACAGAT CGGCAAGCCG GTCTACCTCG TGGATGGCGA AATGGTGTCG
TGGTACGGCA GCCGCGCGAT TGATGGCGTG CGGTATCTGG GGCAATTTGC GAAGACGCTG
CGTTAG
 
Protein sequence
MTYTDAAGLA HAPVDTTPRI ASLVPSITDL LFSLDLGDQL VARTGFCIHP REAVRNVPKV 
GGTKTVKLDK LRELAPTHVI VNIDENTRPT VDRLREFIPH IIVTHPCSPE DNLALYQLLG
GIFRREAQAQ KLADALTQEL EALRGRHFLP HRVLYAIWQD PWMTVSRDTY ISRMLKLVNC
HTWPDDPAPV QCGTDKSGDC ARPNRPDTRY PTFRWSNDVV RNIDCVLLST EPYSFTEEHV
DALEKQIGKP VYLVDGEMVS WYGSRAIDGV RYLGQFAKTL R