Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0139 |
Symbol | |
ID | 8017762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 149894 |
End bp | 150973 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644828921 |
Product | beta-lactamase domain protein |
Protein accession | YP_002980121 |
Protein GI | 241661761 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.486193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCGC TCGAACACCA ACTCGACTAT CCCTTTGGCG ACACGCTTCC CGAGGGCGGC ACGCGGTTTG AAGTCGCCCC TGGCGTCTAC TGGCTGCGCA TGCCGCTGCC GTTTGCGCTC GATCACATCA ACCTCTGGCT GCTGCGCGAT CGCCAGGACG GGCAGGACGG CTGGACGATC ATCGATTGCG GCATCAACCA CGAAGCGATT CGCGGGTACT GGGAAACGAT CTTCGCGAAC CACCTCGACG GCCTGCCGGT GCTGCGCGTG CTGGTCACGC ACTGTCATCC GGACCACGTC GGCCTGTCGA ACTGGCTGTG CGAAGGCGGC GACCAAAAAC GCTGGAACGT GCGCCTGTGG ATGAGCCTGG GCGACTACGC CTTCGCGCGC ATGCTGGTGG GCGGCACGGG TGCGTCGAAT GCCGGCGGCG AATTTGCCGC GCGCCATTTC GAGCGCCACG GCTTGACCGA CCCGACTTCC ATCGAAGGCA TCCGCAATCG CAAGGATTAC TACAGCACGC TCGTGCCCGG CGTGCCGAGC CAGTACCGCC GCCTGATGGA CGGCAATGTC GTCACCATCG GCGAGCACAA GTGGCGTGTC ATCACCGGTT TCGGCCACGC GCCCGAGCAC GTCGCGCTCT ACAGTGAAGA TGCCAATGTG CTGATTTCCG GCGACATGGT CCTGCCGCGC ATTTCCACCA ACGTGAGCGT GTTCGATCTG GAGCCTGAAG CGGATTCGCT CACGCTGTAT CTGGATTCGC TCGGCAAATA CGAGCCGCTG CCCGCGGATG TGCTGATTCT GCCGTCGCAC GGGCGGCCGT TCCGGGGGCT GCATACGCGC ATTCGGCAAC TGCGCGATCA CCATGCGGAT CGCCTGGCCG AAACGTTGGC CGCGTGCAAG GCCGCGCCGC AATCGGCACG CGACATCGTC AACGTCATCT TCAAGCGTCA GTTCGATGTG CACCAGATGA CCTTCGCGAT GGGCGAGGCG CTTGCTCACC TGCATGCGCT GTGGCATCAA GGCGAACTGG TGCGCGAAAC CGGCGCGGAC GGTATCGTTC GATTCCAGGC CGCTGCATAA
|
Protein sequence | MNALEHQLDY PFGDTLPEGG TRFEVAPGVY WLRMPLPFAL DHINLWLLRD RQDGQDGWTI IDCGINHEAI RGYWETIFAN HLDGLPVLRV LVTHCHPDHV GLSNWLCEGG DQKRWNVRLW MSLGDYAFAR MLVGGTGASN AGGEFAARHF ERHGLTDPTS IEGIRNRKDY YSTLVPGVPS QYRRLMDGNV VTIGEHKWRV ITGFGHAPEH VALYSEDANV LISGDMVLPR ISTNVSVFDL EPEADSLTLY LDSLGKYEPL PADVLILPSH GRPFRGLHTR IRQLRDHHAD RLAETLAACK AAPQSARDIV NVIFKRQFDV HQMTFAMGEA LAHLHALWHQ GELVRETGAD GIVRFQAAA
|
| |