| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0133 |
|---|
| Symbol | |
|---|
| ID | 8017756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 142566 |
|---|
| End bp | 143279 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644828915 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002980115 |
|---|
| Protein GI | 241661755 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACG CAACGTCCCG CCGCACGCGT ACCGCGCTCA TCCTGGGCGC GTCGCGCGGC
ATCGGTCTGG AGACCGTCAA GCAATACCGA ACGGATGGCT GGCGCGTGAT CGCCACCGTG
CGCTCGCAAG CAGCCGCAGA AGAATTGCAG GCGCTGGGCG CGGAAACGCA CGTGCTGGAT
CTGACTGACG CCAATGCCGT TGCCGGGCTC GCGTGGAAGC TCGACGGCGA AGCGCTGGAC
GTGGCGATCT ACGTAGCGGG CATCTACGGC CCGCGCACGC AGGGCGCCAC GCCCGTCAGC
CAGGCGGATT TCGATGCCGT GATGCACACC AATGTGTGGG GCCCGATGAA CGTGCTGCCC
GCCGTGCTGC CCATGGTGGA AGCCGGACGC AATGGTGTGG ACGAACCCGG CGGCGTGCTC
GCTGTCATTT CCAGCCGCAT GGGCAGCATC GGCGACATGG AGAGCAACGG CGGCTGGCTG
TATCGCGCGA GCAAGGCAGC GGTGAACGCC GTGCTGCGCG CCGTGTCGAT CGATGCCAAG
AACGCCACGT GCCTGACCTT CCATCCGGGC TGGGTGCAGA CCGACATGGG CGGCGCGGGC
GCGGCCATCA CGCCGCAGCA GAGCGTGGCC GGCATCCGCC GCGTGATTGC CGGCGCCACG
CGCGCCGACA ACGGCGGGTT CCGCAACTAC GACGGCAGCG TCATTGAATG GTGA
|
|---|
| Protein sequence | MTNATSRRTR TALILGASRG IGLETVKQYR TDGWRVIATV RSQAAAEELQ ALGAETHVLD
LTDANAVAGL AWKLDGEALD VAIYVAGIYG PRTQGATPVS QADFDAVMHT NVWGPMNVLP
AVLPMVEAGR NGVDEPGGVL AVISSRMGSI GDMESNGGWL YRASKAAVNA VLRAVSIDAK
NATCLTFHPG WVQTDMGGAG AAITPQQSVA GIRRVIAGAT RADNGGFRNY DGSVIEW
|
|---|
| |