Gene Rpic12D_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0128 
Symbol 
ID8017751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp137939 
End bp139546 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content66% 
IMG OID644828910 
ProductPropionyl-CoA carboxylase 
Protein accessionYP_002980110 
Protein GI241661750 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.818447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGC TAGAGACCAA GCTGAACCCC CGCGCAGAAG ACTTCAAGGC CAACGCCGAT 
GCCATGCGCG CGCTCGTCGC CGACTTGCGC GACAAGGTTG CGCGCATCGC CCAGGGCGGC
GGTGACGACG CCCGCGCCAA GCACCTCGCG CGCGGCAAGC TCCTGCCGCG CGACCGCGTG
CAGCAACTGC TCGACCCCGG CACGCCGTTC CTGGAGTTCT CGCAACTGGC GGCGTATGGC
ATGTACGACG ACGCCGCGCC GGGCGCCGGC ATCATCACCG GCATCGGCCG CATCTCGGGG
CAGGAATGCG TGATCGTCTG CAACGACGCC ACGGTCAAGG GCGGCACGTA TTACCCGATG
ACGGTGAAGA AGCATCTGCG CGCGCAGGAG ATTGCCGAGC AGAACCACCT GCCCTGCGTC
TACCTGGTCG ATTCGGGCGG CGCCAACCTG CCGAACCAGG ACGACGTGTT TCCCGACCGC
GACCACTTCG GCCGCATCTT CTACAACCAG GCCAACCTGT CATCGAAGGG CATTCCACAG
ATCGCGGTGG TGATGGGCTC GTGCACGGCG GGAGGCGCGT ATGTGCCGGC CATGAGTGAT
GAGTCGATCA TCGTCAAGGA ACAGGGGACG ATCTTCCTGG CAGGCCCGCC GCTGGTGAAG
GCCGCGACCG GCGAAGTGGT GAGTGCCGAA GACCTGGGCG GCGCCGATGT ACATACGCGG
CTGTCCGGCG TGGCGGATTA CTTCGCCAAC AACGATTCGC ACGCGTTGGC GCAAGCCCGA
AGCATCGTCG CGCACCTGAA CCGCCGCAAG CCGGAGCAGG TGCAGATTCA TGCGCCGGTC
GAACCGCGCT ACGCAGCCGA AGAACTCTAC GGCGTGATCC CGACCGACAC GCGCAAGCCG
TTCGACGTGC GCGAAGTCAT CGCCCGCATC GTCGACGATT CCGCCTTTGA CGAATTCAAG
GCGCGCTACG GCACGACGCT GGTCTGCGGC TTTGCGCGCA TCTGGGGCTA CCCGGTCGGC
ATCATCGCCA ACAACGGCAT TCTGTTTTCC GAGGCTGCGT TGAAGGGCGC GCACTTCATC
GAGCTGTGCT GTCAGCGCAA GATCCCGCTG GTGTTCCTGC AGAACATCAC CGGCTTCATG
GTGGGCCGCA AGTACGAGAA CGAAGGCATC GCCAAGAACG GCGCGAAGAT GGTGACAGCG
GTGGCGACGG CGCAGGTGCC GAAGTTCACG GTCATCATTG GCGGCTCGTT TGGCGCGGGC
AATTACGGCA TGTGCGGCCG GGCGTATTCG CCGCGCTTCC TGTGGATGTG GCCGAACGCG
CGCATCTCCG TGATGGGCGG CGAACAGGCC GCAAGCGTGC TCGCCACCGT GCGCCGCGAC
GGCATCGAAG CCAAGGGCGG CCAGTGGAGC GCCGATGAAG AGGCCGCGTT CAAGGCGCCG
ATCCGCGACC AATATGAGCG CCAGGGCCAT CCGTACTACG CCAGCGCCCG CCTGTGGGAC
GACGGCGTGA TCGACCCTGC CGACACGCGC AGCGTGCTGG GCCTCGGGCT GTCGGCCAGC
CTGAACGCGC CGATCGGCGA CATGAACTTC GGCGTGTTCC GCATGTAA
 
Protein sequence
MPTLETKLNP RAEDFKANAD AMRALVADLR DKVARIAQGG GDDARAKHLA RGKLLPRDRV 
QQLLDPGTPF LEFSQLAAYG MYDDAAPGAG IITGIGRISG QECVIVCNDA TVKGGTYYPM
TVKKHLRAQE IAEQNHLPCV YLVDSGGANL PNQDDVFPDR DHFGRIFYNQ ANLSSKGIPQ
IAVVMGSCTA GGAYVPAMSD ESIIVKEQGT IFLAGPPLVK AATGEVVSAE DLGGADVHTR
LSGVADYFAN NDSHALAQAR SIVAHLNRRK PEQVQIHAPV EPRYAAEELY GVIPTDTRKP
FDVREVIARI VDDSAFDEFK ARYGTTLVCG FARIWGYPVG IIANNGILFS EAALKGAHFI
ELCCQRKIPL VFLQNITGFM VGRKYENEGI AKNGAKMVTA VATAQVPKFT VIIGGSFGAG
NYGMCGRAYS PRFLWMWPNA RISVMGGEQA ASVLATVRRD GIEAKGGQWS ADEEAAFKAP
IRDQYERQGH PYYASARLWD DGVIDPADTR SVLGLGLSAS LNAPIGDMNF GVFRM