| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0125 |
|---|
| Symbol | |
|---|
| ID | 8017748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 135051 |
|---|
| End bp | 136139 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644828907 |
|---|
| Product | biotin synthase |
|---|
| Protein accession | YP_002980107 |
|---|
| Protein GI | 241661747 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0502] Biotin synthase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00433] biotin synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCCA CTCCGCTCAA CTTCGTGCCG AACGCCGCCA AGGTGCCGCC CACGCCCGGG
CAGAATCCCA ACGCCCGCTG GAGCCGCGAA GCCATCGAAG CGCTGTTCGC GCTGCCGTTC
AACGACCTGC TGTTCCAGGC GCAGCAGGTG CACCGCGCCA ACTTTGATGC GAATGCCGTG
CAGCTCTCGA CGCTGCTGTC CATCAAGACC GGCGGCTGCC CCGAAGACTG CTCGTACTGC
CCGCAATCGG CGCGCTACGA CACCGGTGTC GAGGCTGAAA AGCTGATGCC GATTGACGAA
GTGCTGGAAG CCGCCTCGCG CGCCAAGCAA AACGGCGCGA GCCGCTTCTG CATGGGCGCC
GCCTGGCGCA ACCCCAAGCC GCATCAGCTC GACGCCGTGG CCGACATGGT GCGCGGCGTG
AAGGCGATGG GGCTGGAGAC GTGCGTGACA CTCGGCATGC TCAAGCAGGA ACAGGCCGCG
CAGTTGAAGG AAGCGGGCCT GGACTACTAC AACCACAACC TCGACACCGC GCCCGAGTTC
TACGGCGAGA TCATCACCAC GCGCACGTAC CAGGACCGGC TCGATACGCT CGAGCACGTG
CGTGACGCCG GCATCAACGT GTGCTGCGGC GGCATCGTCG GGCTGGGGGA ATCGGTGCAT
GAGCGTGCGG GGCTGATTGC CGAGCTGGCG AACATGGAGC CGTATCCGGA TTCGGTGCCG
ATCAACAACC TGGTGAAGGT GGAAGGTACG CCGCTGGCGG GCAACGAGGA ACTGGACCCG
TTCGATTTCG TGCGCACGAT TGCCGTGGCG CGCATCACGA TGCCCAAGGC GATGGTGCGG
CTCTCCGCTG GCCGCGAGGC GATGGACGAT GCCTTGCAGG CGCTGTGCTT CATGGCGGGC
GCCAACTCGA TCTTCTATGG CGAGAAGCTG CTGACGACGG ACAACCCTGA GGCGGATGCG
GATCGGAAGC TGCTGGCGCG GTTGGGGATG CGGGTGGAGG TGCAGGATCA TCTGCATCAG
AGCGCTGATG CTTCGCACTC GCATTCGCAT TCGTCGCATT GCCATATCGA CATTACGCCT
GCGGACTGA
|
|---|
| Protein sequence | MQSTPLNFVP NAAKVPPTPG QNPNARWSRE AIEALFALPF NDLLFQAQQV HRANFDANAV
QLSTLLSIKT GGCPEDCSYC PQSARYDTGV EAEKLMPIDE VLEAASRAKQ NGASRFCMGA
AWRNPKPHQL DAVADMVRGV KAMGLETCVT LGMLKQEQAA QLKEAGLDYY NHNLDTAPEF
YGEIITTRTY QDRLDTLEHV RDAGINVCCG GIVGLGESVH ERAGLIAELA NMEPYPDSVP
INNLVKVEGT PLAGNEELDP FDFVRTIAVA RITMPKAMVR LSAGREAMDD ALQALCFMAG
ANSIFYGEKL LTTDNPEADA DRKLLARLGM RVEVQDHLHQ SADASHSHSH SSHCHIDITP
AD
|
|---|
| |