| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0112 |
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| Symbol | |
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| ID | 8017735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 120507 |
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| End bp | 121394 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644828894 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002980094 |
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| Protein GI | 241661734 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.245177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGCT CAGTCTTTCG ACCGGGGCTG TTCCAGGGGC AGGTGGCCGT GGTGACGGGC
GGCGGCAGCG GCATCGGCCG GTGCACGGCG CATGAGTTGG CGTCGCTGGG CGCGGCCGTT
GCGCTGGTGG GGCGCAATGC AGAGAAGCTC GCCGCCGTGC GCACGGAGAT CGTCGAAGCC
GGCGGCACCG CGCACACCTA CGTTTGCAAC ATCCGCGACG AGGCCGCCGT GCAAGCGACC
GTTGCGCAGA TCTACGGCGC GCACGGCCGC ATCGATGCGC TGGTCAACAA CGCGGGCGGG
CAGTTTCCGG CGCCGCTCAA GGGCATTTCC GCCAAGGGCT GGGAAGCCGT CGTGCAGACA
AACCTGACGG GCGGCTTTTT GATGGCGCGC GAGTGCCTGA ACCAGGCGAT GCAGCAGCGC
GGTGGCGCCA TCGTCAACAT CGTGGCGGAC ATGTGGGGCG GTATGCCGAA CATGGGCCAC
TCCGGTGCGG CGCGTGCGGG CATGGTCAAC TTCACGGAGA CGGCCGCGTT CGAGTGGGCG
CAGTACGGCG TGCGCGTGAA CGCGGTGGCG CCGGGCTACG TGGCGTCGTC GGGCATGGAT
GCGTATCCGC CGTGGATGGC CGAGACCATC CGCAGCATGC CTTCGACCGT GCCGCTTGGT
CGCTTTGCCA CCGAGGCGGA AGTGTCTTCG GCCATCGTGT ATCTGCTCTC GGAAGCCGCA
GCGTTCATTA CCGGCACGAC GTTGCGCGTG GACGGCGGCC GCCCGAACGT GCGGCCCGGT
TCGCCCATGC CGGCTCCGCG TCATGGTGCC GAGCCGTTCA ACGGCTTCCA CCTGGCCGTG
ACGCCCAAGG TGCTGCAAGG CGAGGAGGAC CGAAATGCCG GCGCTTGA
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| Protein sequence | MYRSVFRPGL FQGQVAVVTG GGSGIGRCTA HELASLGAAV ALVGRNAEKL AAVRTEIVEA
GGTAHTYVCN IRDEAAVQAT VAQIYGAHGR IDALVNNAGG QFPAPLKGIS AKGWEAVVQT
NLTGGFLMAR ECLNQAMQQR GGAIVNIVAD MWGGMPNMGH SGAARAGMVN FTETAAFEWA
QYGVRVNAVA PGYVASSGMD AYPPWMAETI RSMPSTVPLG RFATEAEVSS AIVYLLSEAA
AFITGTTLRV DGGRPNVRPG SPMPAPRHGA EPFNGFHLAV TPKVLQGEED RNAGA
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