Gene Rpic12D_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0106 
Symbol 
ID8017729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp112775 
End bp113458 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID644828888 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_002980088 
Protein GI241661728 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGA AGATTCCCAA CGTCCTGACC AAGGAACAGG TCGCGCAGTG CCGCGCCACA 
ATCGACGCTG CCGAGTGGGT GGACGGCAAG GTCACGGCTG GCGCCCAGTC GGGCCAGGTG
AAGCACAACA TGCAGCTGCC CGAACGCTCG CCGGCTGCGC GCGAGGCCGG CACCTTGATC
CAGGATGCGC TTTCCGCCAA TACGCTGTTC TTCTCCGCCG CGTTGCCGCT CAAGGTGTTT
CCGCCGCTGT TCAACCGGTA TGCGGGCGGC CAGACCTTCG GCAACCACGT CGACAACGCC
GTGCGCCATC TGCGCGGCAC CGCTTTCCGC ATCCGCAGCG ACCTCTCCTG CACGCTGTTC
CTGACCGAGC CCGAAGACTA CGACGGCGGC GAACTCGTCA TCGACGATAC CTTTGGCGAA
CACCGCGCCA AACTTGCGGC GGGCGACATG GTGCTCTACC CGAGCAGCAG CCTGCACCGC
GTGACGCCGG TGACGCGCGG TGCGCGCGTT TGCTCGTTCT TCTGGTTGCA GAGCATGGTG
CGCAGCGATG CGCATCGCAC GCTGCTGTTC CAGATGGACA CGGAACTGCA GCGGCTGATG
GGGCTGCTGG GGCAGGACGA CCCGTCCGTC ATTGCGTTGA CGGGGACGTA TCACAACCTG
CTGCGGGAGT GGGCCGACGC CTGA
 
Protein sequence
MLLKIPNVLT KEQVAQCRAT IDAAEWVDGK VTAGAQSGQV KHNMQLPERS PAAREAGTLI 
QDALSANTLF FSAALPLKVF PPLFNRYAGG QTFGNHVDNA VRHLRGTAFR IRSDLSCTLF
LTEPEDYDGG ELVIDDTFGE HRAKLAAGDM VLYPSSSLHR VTPVTRGARV CSFFWLQSMV
RSDAHRTLLF QMDTELQRLM GLLGQDDPSV IALTGTYHNL LREWADA