Gene Rpic12D_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0105 
Symbol 
ID8017728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp111839 
End bp112765 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content67% 
IMG OID644828887 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002980087 
Protein GI241661727 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CGCTTTCCAT CGATGCCGCC ACCGCTGCCG CAGATGCTGC GCTGTTTCCC 
GGCTTCCGTC CGTTTCGCCA GGTGGCCAAC GGGGTGGAAA TTGCGGGAGT GATCGGCGGA
AGCGGTCCGC CGCTGCTATT GCTGCACGGC CATCCGCAAA GCCATGTGAT CTGGCACAAG
GTCGCGCAGG AACTGGCGCA CGACTACACC GTCGTGGCGA CCGATCTGCG CGGCTATGGC
GCCTCGTCCA AACCGGCCGG CAGCGCCCGG CACGCGGAAT ACAGCAAGCG CACCATGGCG
CAGGACCAGG TGGAGGTGAT GCGCGCGCTC GGCTTCGGCC GCTTCCGGCT GTGCGCGCAT
GACCGCGGGG CGCGTGTGGC GCATCGGCTG TGTGTCGATC ATCCCGTCCA CGTCGAGCGC
GCCATGCTGC TCGACATCGC CCCCACGCTG GCGATGTACG AAAACACCGA CATGGCGTTT
GCGTCTGCCT ACTGGCACTG GTTTTTCCTG ATCCAGCCGT CGCCGTTTCC TGAAACGCTC
ATCAACGCCA CGCCCGATTT CTACATCGGT AAGCTGATGG GCCTGCGCCA CGCAGGCCTC
GAACCGTTCG CCCCGGAAGC GATGGCGACC TACGCCGCTG CCATGCGCGA GCCCGCCTGC
GTGCACGCCA TGTGCGAGGA CTACCGCGCC GCCGCCACCA TCGACCTCGA ACATGATCGC
GCCGACCGCG ACGCAGGCAA GCGCGTGAGC GTGCCGCTGC GTGTGCTGTG GGGCGAGCAT
GGCGTGATCC AACGCTGCTT CAAGCCGTTG GAGTTGTGGA AAGCGGTGGC GGACGACGTG
AGCGGCGGCA CGGTGCCGTG CGGGCACTAC GTGCCGGAGG AAGCCCCGGA GGCCTTGCTC
GAGGAGATGC GCGCGTACTT CGCCTGA
 
Protein sequence
MTTPLSIDAA TAAADAALFP GFRPFRQVAN GVEIAGVIGG SGPPLLLLHG HPQSHVIWHK 
VAQELAHDYT VVATDLRGYG ASSKPAGSAR HAEYSKRTMA QDQVEVMRAL GFGRFRLCAH
DRGARVAHRL CVDHPVHVER AMLLDIAPTL AMYENTDMAF ASAYWHWFFL IQPSPFPETL
INATPDFYIG KLMGLRHAGL EPFAPEAMAT YAAAMREPAC VHAMCEDYRA AATIDLEHDR
ADRDAGKRVS VPLRVLWGEH GVIQRCFKPL ELWKAVADDV SGGTVPCGHY VPEEAPEALL
EEMRAYFA