Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0091 |
Symbol | |
ID | 8017714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 95340 |
End bp | 96062 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644828873 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002980073 |
Protein GI | 241661713 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.994797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGACT TCCGCACTTA CGGCCTCGCC GCGCCCCCAC ACTCGCACGA CTTCATGCAG GTCGTGATGC CCGCACGCGG CATCCTCGAG ATGGACGTCG ACGGCCGCGG CGGCCGTGTC GACACGCACC ACGCCGCGCT CATTCCGGCC GGCGCTACAC ATGCGTTTGA AGCCACGGGC GCCAACCGCT TCATCGTCTT CGACATTCCC GGGCAAACCG CGGACGCCCC CAGCCTGGGC GGCCTGGCCG ATCGCGTGTT CTTTCCGCTC ACGCCAGGCC TGCGCGCACT GACGACATGG CTGCAGGACG CGCCCATCGT CGACACGGTG CTGGCCACTG CGTGGTCGTC ACTCGCGCTG GCAACGCTGG CGGCGCATCC GGCCAACCAG TCGACGCAGA TCCGCGCACG CCCCGATGCA CGTGCCGAGC GCGCATGGCA TGCCATCGAA CACCGCTACG CGGAGCCGCT CACGGTCGAT GCGCTTGCCG CAGAAGCGGG CGTCAGCGCG CGCCACCTCG CCACGCTGTT TCGCGCCGCC TACGGCACCA CGCTGCATGC GCATCTGGCC CAGGTACGGC TGCGGCATGC ATTGACGCTG CTGGAAACCA CCGCCCTGCC CATCGCGGAG ATCGCCGCGC GCACCGGCTA TTACGACCAA AGCGCACTCA CGCGCCACCT CAAGGCCGCG CACGGCATCA CGCCCGCTGC GGTACGCCGC TAG
|
Protein sequence | MLDFRTYGLA APPHSHDFMQ VVMPARGILE MDVDGRGGRV DTHHAALIPA GATHAFEATG ANRFIVFDIP GQTADAPSLG GLADRVFFPL TPGLRALTTW LQDAPIVDTV LATAWSSLAL ATLAAHPANQ STQIRARPDA RAERAWHAIE HRYAEPLTVD ALAAEAGVSA RHLATLFRAA YGTTLHAHLA QVRLRHALTL LETTALPIAE IAARTGYYDQ SALTRHLKAA HGITPAAVRR
|
| |