Gene Rpic12D_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0091 
Symbol 
ID8017714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp95340 
End bp96062 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID644828873 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002980073 
Protein GI241661713 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.994797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGACT TCCGCACTTA CGGCCTCGCC GCGCCCCCAC ACTCGCACGA CTTCATGCAG 
GTCGTGATGC CCGCACGCGG CATCCTCGAG ATGGACGTCG ACGGCCGCGG CGGCCGTGTC
GACACGCACC ACGCCGCGCT CATTCCGGCC GGCGCTACAC ATGCGTTTGA AGCCACGGGC
GCCAACCGCT TCATCGTCTT CGACATTCCC GGGCAAACCG CGGACGCCCC CAGCCTGGGC
GGCCTGGCCG ATCGCGTGTT CTTTCCGCTC ACGCCAGGCC TGCGCGCACT GACGACATGG
CTGCAGGACG CGCCCATCGT CGACACGGTG CTGGCCACTG CGTGGTCGTC ACTCGCGCTG
GCAACGCTGG CGGCGCATCC GGCCAACCAG TCGACGCAGA TCCGCGCACG CCCCGATGCA
CGTGCCGAGC GCGCATGGCA TGCCATCGAA CACCGCTACG CGGAGCCGCT CACGGTCGAT
GCGCTTGCCG CAGAAGCGGG CGTCAGCGCG CGCCACCTCG CCACGCTGTT TCGCGCCGCC
TACGGCACCA CGCTGCATGC GCATCTGGCC CAGGTACGGC TGCGGCATGC ATTGACGCTG
CTGGAAACCA CCGCCCTGCC CATCGCGGAG ATCGCCGCGC GCACCGGCTA TTACGACCAA
AGCGCACTCA CGCGCCACCT CAAGGCCGCG CACGGCATCA CGCCCGCTGC GGTACGCCGC
TAG
 
Protein sequence
MLDFRTYGLA APPHSHDFMQ VVMPARGILE MDVDGRGGRV DTHHAALIPA GATHAFEATG 
ANRFIVFDIP GQTADAPSLG GLADRVFFPL TPGLRALTTW LQDAPIVDTV LATAWSSLAL
ATLAAHPANQ STQIRARPDA RAERAWHAIE HRYAEPLTVD ALAAEAGVSA RHLATLFRAA
YGTTLHAHLA QVRLRHALTL LETTALPIAE IAARTGYYDQ SALTRHLKAA HGITPAAVRR