Gene Rpic12D_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0074 
Symbol 
ID8017697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp80300 
End bp81313 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content67% 
IMG OID644828857 
Productzinc-binding alcohol dehydrogenase family protein 
Protein accessionYP_002980057 
Protein GI241661697 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02817] zinc-binding alcohol dehydrogenase family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG TTGCCTACTA CCAAAGCCTG CCCATCGACC GCCCCGAGGC GCTCGTCGAC 
CTGACCCTGC CCGAACCCAC GCCAGGCCCC CGCGATGTGC TTGTGGAAGT GCGCGCCATC
TCCGTCAACC CGGTCGATGT GAAAGTGCGC CTCGGCATGC CGCCGGTGGA TGGTCAGCCC
CGCGTGCTGG GCTGGGATGC TGCGGGCGTG GTGCGCGCCG TCGGCGCCGA GGTGTCGCTC
TTCAAGCCGG GCGATGCGGT CTGGTATGCC GGTGCCCTGC AGCGCCCGGG CACCAACAGC
GAGCTGCATG TCGTAGACGA ACGCGTGGTC GGCGCGATGC CCGCCACGCT CGGGTTTGCG
CAGGCAGCTG CGCTGCCGCT CACCGCCATC ACCGCCTGGG AATTGCTCTT CGACCGGCTG
CAGGTGCCGG AACCTGCAGC GCCCAGCGGG AAGACGGTGT TGATTGTCGG CGCGGCGGGC
GGTGTTGGGT CGGTGCTCGT GCAGCTCGCG CGCCGGTTGA CGGGCCTGAC CGTGATCGGC
ACCGCCTCGC GCCCGGAGAC GGCCGCCTGG GTGCGCGAGC TGGGCGCCCA CCATGTGATC
AACCACGCGC AGCCGCTGGC CGCGGAACTG CATCGCATTG GTGTGCCGGC GGTGGATTAC
GTCGCCAGCC TGAACCAGAC CGAACACCAC TTCGAGCAGA TCGTCGAGGC GCTCAAGCCG
CAAGGTCGCC TTGCGTTGAT CGACGACCCG GCGCAGCTCG ACGTGCGCAA GCTCAAGGCG
AAGAGCCTGT CGCTGCACTG GGAGTTCATG TACACGCGCT CCATGTTCGG CACGGACGAC
CAGATCGAGC AGCACCGCCT GCTCAATCGC GTGGCCGCGC TCATTGACGA GGGCATGTTG
CGCTCCACCA TGAACGAGCA CTTCGGCACC ATCAATGCCG CCAACCTCAA GCGCGCACAC
GCCTTTATTG AAAGCAATCA GGCGCGCGGC AAGATCGTGC TGGAAGGGTT TTGA
 
Protein sequence
MKAVAYYQSL PIDRPEALVD LTLPEPTPGP RDVLVEVRAI SVNPVDVKVR LGMPPVDGQP 
RVLGWDAAGV VRAVGAEVSL FKPGDAVWYA GALQRPGTNS ELHVVDERVV GAMPATLGFA
QAAALPLTAI TAWELLFDRL QVPEPAAPSG KTVLIVGAAG GVGSVLVQLA RRLTGLTVIG
TASRPETAAW VRELGAHHVI NHAQPLAAEL HRIGVPAVDY VASLNQTEHH FEQIVEALKP
QGRLALIDDP AQLDVRKLKA KSLSLHWEFM YTRSMFGTDD QIEQHRLLNR VAALIDEGML
RSTMNEHFGT INAANLKRAH AFIESNQARG KIVLEGF