Gene Rpic12D_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0060 
Symbol 
ID8017683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp63584 
End bp64723 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content56% 
IMG OID644828844 
Producthypothetical protein 
Protein accessionYP_002980044 
Protein GI241661684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGA TTTCGTTTCC GAGCAAGGAT GAGCGCTTGC CAAGGCCCAT TGCTACCTGT 
ACCAAACAGA AAGGAAAGCC GCTGGGTGAT TGGGAGAGGC AGCACCGGCT CCATATCGAC
AAGCCTGCAT ATAGAGAAGA AATAGAAGAA ATGGGCAATG TGTATAGCAT TAATTCAACC
TATCTAGAGA TCGTTGACGA TGCTCATGAC AGAATACAAG CCATTGGTTT CGCTTGGATC
ACAGGAATCG CCACTTCCGC AATAGCCGGA TTTATGGGCA AATTCTTTAT CACACTGCCC
TCAATTCACT CACCAGAAAT TAAGGCTCAA GACGGATACT GGCCTCTTGT AATCATTTTT
GCATCCGTTT TTTCGGCAAT GGCACTTCTG TTCTTCCTGC TCGGGCTGGA TATGATGCGC
CGCAACCTCT TTACCCTGAA GCGCCGCCCC ATCCGCCTGA ACCGTAGGAC CCGCCGCATC
TACGCCATCC GCACCAAGGA CCCAGGCGGC ATCTGGGAAG TGCCCTGGAG CAACGACGAA
TTCTTCTGCA TTGGCAAGCG CAAGGTTGGT GGCCTCAAGC GCGCCTATGA CATGTACGAC
GTCCGTCATT ACACGCTGGA CGAACAGGGC AACGTGGTGC GGGCCTTTGT GCTTGGGCAA
ATGGTCTTCA CCCTCGAGCA GGCTCAACTG CAATGGGAGT ACTTCCGACG CTATATGCAA
GACGGGCCGG CCAATCTGCC CGAGCCGCAC CGCTTCTGGG CACTGCGCGA ATCCTTCGCC
GAGAGCTTCA GAATTTGCCA GCTCAGCAAG TCCTCAAACC CGCTCGTTTC GCTCTTTGAT
CTGATTTTCT TGCCCTTCGC ATTGCTGGAT ACCGTCTGCC GCTGGCTCAC GCTCATCACC
TGCAGCGACC CCGTATGGCC CCCCGAGATC GAAGCCGCCT GCAAACCCGA GCCGAACGAC
CCGTACGCCC GCCCCTATGC CGATGATTTT GTCGGCTTTG CCAGCGGTCC CTACGGCCAG
CCCTCGCGCA GTGACATCGA CCGGATGCTG GCGCTGGAGA AATACCGGCG GCGGGAAGGG
GTCCTCACAC GCGCCGAGGC GGAAGCGCTG ATCCGGAAGC AAGCAGAGGC CGGTGCATGA
 
Protein sequence
MMKISFPSKD ERLPRPIATC TKQKGKPLGD WERQHRLHID KPAYREEIEE MGNVYSINST 
YLEIVDDAHD RIQAIGFAWI TGIATSAIAG FMGKFFITLP SIHSPEIKAQ DGYWPLVIIF
ASVFSAMALL FFLLGLDMMR RNLFTLKRRP IRLNRRTRRI YAIRTKDPGG IWEVPWSNDE
FFCIGKRKVG GLKRAYDMYD VRHYTLDEQG NVVRAFVLGQ MVFTLEQAQL QWEYFRRYMQ
DGPANLPEPH RFWALRESFA ESFRICQLSK SSNPLVSLFD LIFLPFALLD TVCRWLTLIT
CSDPVWPPEI EAACKPEPND PYARPYADDF VGFASGPYGQ PSRSDIDRML ALEKYRRREG
VLTRAEAEAL IRKQAEAGA