Gene Rpic12D_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0043 
Symbol 
ID8017666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp47280 
End bp48224 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID644828827 
Productpeptidase M48 Ste24p 
Protein accessionYP_002980027 
Protein GI241661667 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGTG TCACACGCTC CCTGCTGACC GCAATCGGCC TCGCGCTATC TGCGTGGGCA 
ACCGCCATGG ACGGCCCGCT GCCCGTGCCC GCCGACGGCG TGAAGCTGGA AGCGCCCACC
ACCACATCGC CCAACATCCG GCTCGTCATT CCGGCCGAGG AAATCGATAA GCGCGCGCTG
GCCGAATATC AGGGGATCAT CGACAACGCG GCCCACGAAG GCGCGCTGGC GCCCGACAAC
GTGCCCGATC TGATCCGCAT CCGCAGCATC GTCAGGCGCC TCACACCGCA GGCACCGCGC
TGGAACCCCG ACGCCGCGCA CTGGCAGTGG GAGGTCAACC TGATCGGCTC GTCGCAGGTG
AACGCGTTCT GCATGCCCGG CGGCAAGATC GCCGTGTTCT CGGGGCTGCT CGAACAGTTC
AAGCTGACGG ACGACGAACT CGCCATGGCG CTCGGCCACG AGATCGCCCA CGCGTTGCGC
GAGCACGCCC GCGCCCGCGC CGGCCAGCGC GAGATCACCA ATCTGGGCGC CAACGTCATC
TCGCAATTGT TCGGCTTCGG CAACCGGGGC GATACGGACC TTGGCGAAGG CGCCAAGATG
CACCTGCTGG CCTTCTCGCG GGCGGAGGAA ACCGAGGCTG ACCTGGTCGG CATGGACATC
GCTTCCCGCG CCGGCTACGA CCCGCGCGCC GCGCTCACGC TGTGGCAGAA AATGGGGTCG
ATCGGCGGGA CGGAGCAAAA GCAGTTTCTG TCGACGCACC CGTCGGGACG CACGCGGATG
GCGGTGCTGT CGCGTCATTT GCCCGAAACG CTCACGCTGT TTGCCGACGC CCGCCATATG
ACGATGGCGA AGCTGCCCGA ATATCGGTCG AACATGCAAT ATCTGGGGGC TGCGCCTGTT
GATAATGGCG ACGAAGCGCC GATGCGGCCG ATGGTACGGC GGTAG
 
Protein sequence
MPRVTRSLLT AIGLALSAWA TAMDGPLPVP ADGVKLEAPT TTSPNIRLVI PAEEIDKRAL 
AEYQGIIDNA AHEGALAPDN VPDLIRIRSI VRRLTPQAPR WNPDAAHWQW EVNLIGSSQV
NAFCMPGGKI AVFSGLLEQF KLTDDELAMA LGHEIAHALR EHARARAGQR EITNLGANVI
SQLFGFGNRG DTDLGEGAKM HLLAFSRAEE TEADLVGMDI ASRAGYDPRA ALTLWQKMGS
IGGTEQKQFL STHPSGRTRM AVLSRHLPET LTLFADARHM TMAKLPEYRS NMQYLGAAPV
DNGDEAPMRP MVRR