Gene Rpic12D_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0042 
Symbol 
ID8017665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp46363 
End bp47271 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID644828826 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_002980026 
Protein GI241661666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCA ACCGCCTGGC GCTCATGTTG GCTACCGCTG CGGCACCCGT TCTGTGGGGC 
ACGACATATC TGGTGTTCAC GCAAACGCTG CCCGTTGGTC ACCCGTTGCT GGTCGGCGCG
CTGCGTGCGC TCCCGGCAGG GGTGCTGCTC ATGCTTCTCG GCCCGGGCCT GCCGCCGCGT
AGCAAGTTGC TTCCCTTGCT GTTTCTCGGG CTGGCGAATA TCGGCGTGTT CTTCGCGCTC
TTGTTCTTGG CGGCGCAGCG CCTGCCAGGT GGCGTGGCAG CGACGATCAT GTCGGCGCAA
CCGCTGGTGG TGGCGCTGCT GGCGTGGCCC CTGCTGGCGC GCAAGCCGCG TCCGGCGCAA
CTGGCGGCAG CGCTGGCAGG GTCGATGGGG GTGGGGCTGC TGATTCTCGG CCCCGCGGCC
AGGCTCGATG CGATTGGTGT GGCGGCAGCC CTGGCCGCTG CGTTTTCGAT GGCGATGGGC
ACCGTGCTCA TTGAACGCTG GGGCCGAATC GGCACGCCGC TGGCGGTGGC TGCCTGGCAG
CTCGCGCTGG GCGGGCTGGT GCTGCTGCCG GTGGCGCTGT GTGTGGAAGG TTTGCCGCCC
ATGCTCACAG CGCGCAACGC GGTGGGCTTC GCTTACCTTA TCGTCATCGG CACGGCGTTG
GGCTACTGGC TGTGGGTGCG CGGTATCGGC GTGCTGGGCG CAGACGTGAC GTTCCTGTCG
CTGCTCAGCC CGCTGACGGC GACAGTGCTC GGCGCGCTGG TCCTGGGCGA GTGGTTCAGC
CCGATGCAGA CGGGCGGCGC GGTGCTGATC CTGGGCGCAA CGGTGGCGGG GATGGCGTTG
TCGCGGCGGG CACGGCGAGA GCCCGCAGTG CAGCGTCCTG GCTCAAGCGA GCAGCTGCAG
CCGCATTGA
 
Protein sequence
MQFNRLALML ATAAAPVLWG TTYLVFTQTL PVGHPLLVGA LRALPAGVLL MLLGPGLPPR 
SKLLPLLFLG LANIGVFFAL LFLAAQRLPG GVAATIMSAQ PLVVALLAWP LLARKPRPAQ
LAAALAGSMG VGLLILGPAA RLDAIGVAAA LAAAFSMAMG TVLIERWGRI GTPLAVAAWQ
LALGGLVLLP VALCVEGLPP MLTARNAVGF AYLIVIGTAL GYWLWVRGIG VLGADVTFLS
LLSPLTATVL GALVLGEWFS PMQTGGAVLI LGATVAGMAL SRRARREPAV QRPGSSEQLQ
PH