Gene Rpic12D_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0038 
Symbol 
ID8017661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp42908 
End bp43816 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID644828822 
Productband 7 protein 
Protein accessionYP_002980022 
Protein GI241661662 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAAG TCACGGCAAG CAAGCTGCCG GTCAAACTGC TCGCGCTCGT CTTCGGCGCC 
GTCGCGGCGC TGGTGATCGG GCGAACTTTC CTGCTGAACT GGCAGATCAT TCCGCCCGGC
TACACGGGCA TCAAGATCAA CCGGCTCGTC GATCGCGGCA TCACGCATGA AAACGTCGTC
ACCGGGTTCG TGTTCTACAA CCCCGTGCAG ACTGCGATCA TTCAGTACCC GACTTACGTG
CAGCGCGTGA TCTGGACGCA AGACGTGAAC GAAGGCCGCG CGCTCAACGA AGAGCTGACG
TTCAACACGA AGGACGCCGT GCCCGTCAAC GTGGACGTGG CTGTCTCGTA CCAGCTCGAC
CGCGAGAAGG TGCCAGCCTT CTACACCAAC TTCCGCGCCG ATCGCATCGA GACGTTCACG
CACGGCTACC TGCGCGACAC CGCGCGCAAC GTGATCGTCG CCATGGGCTC GGAATACAAC
TTTGACGACG TGAACGGCGG CAAAAAGGAA GAGTTCGTCG CGCGGCTGAC CAAGGAGCTG
GACACGCGGC TCGCACCGCT GGGCGTGTCG ATCAAGCAGT TCGGCATCGT CGGCTCGCTG
CGCCCCCCGC GCGCGTTGCT TGATGCAGTG AGCGCCAAGA CCAAGGCCAT CCAGGATGCG
ATCCGCACCG AGAACGAAGT GCGCTCCGCC CAGGCCGAGG CGAAGAAGAA AGTGGCGATT
GCCGAAGGGG AAGCCGCGGC CAACCATGCG CTCGCCTCGT CGCTGGATGA CCGGCTGCTC
GCCTGGGAAC GCCTGAAGCT CGAACGTGCC GCCATCGAGA AATGGAACGG CGTGACGCCG
AGCGTGATGG CGGGCGGTAA CGGCGGCGGC ATGTTGTTCA ACATCCCGGC GGGGGCGCAG
AGCAAGTAA
 
Protein sequence
MPQVTASKLP VKLLALVFGA VAALVIGRTF LLNWQIIPPG YTGIKINRLV DRGITHENVV 
TGFVFYNPVQ TAIIQYPTYV QRVIWTQDVN EGRALNEELT FNTKDAVPVN VDVAVSYQLD
REKVPAFYTN FRADRIETFT HGYLRDTARN VIVAMGSEYN FDDVNGGKKE EFVARLTKEL
DTRLAPLGVS IKQFGIVGSL RPPRALLDAV SAKTKAIQDA IRTENEVRSA QAEAKKKVAI
AEGEAAANHA LASSLDDRLL AWERLKLERA AIEKWNGVTP SVMAGGNGGG MLFNIPAGAQ
SK