Gene Rpic12D_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0036 
Symbol 
ID8017659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp40910 
End bp41695 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID644828820 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_002980020 
Protein GI241661660 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGCA TCATTTCCGC CAACCTCAAC GGCGTGCGCT CCGCTGCCAG CAAAGGCTTT 
TTTGATTGGA TGGGCAAGCA GGACGCCGAC TTCGTCTGCG TGCAGGAACT GAAATGCGCG
CAAGACGACA TGACCCCGGA ATTTCTGGCG CCGCACGGCT ATCACGGCGT GTTCCAGCAC
GCGGTAAAGA AAGGCTACAG CGGCGCGGGC CTGTACACGC GCCACAAGCC CGACGAAGTC
ATCGTCGGCT TCGATAACGG CGAGTTCGAT GCCGAAGGCC GCTACGTCGA GGCCCGCTAC
GGCAAGCTGT CGGTCATCTC GGTCTACGTG CCGTCGGGCT CCAGCGGCGA AGAGCGTCAG
CAGGCCAAGT TCCGCTTCAT GGACCTGTTC ATGGAGCACC TCAAGGACCT GCGCCACGAA
AAGGGCCGCG AGGTCGTGCT GTGCGGCGAC GTCAACATCG TGCACAAGGA AATCGACATC
AAGAACTGGA AGGGCAACCA GAAGAACTCC GGCTGCCTCC CTGAAGAGCG CGCGTGGCTG
ACCAAGCTCT TCGATGAGGT CGGCTACGTG GACGTGTTCC GCACGCTCGA CCAGCGCCCC
GAGCAGTACA CGTGGTGGAG CAACCGCGGC CAGGCATACG CGAAGAACGT CGGGTGGCGG
ATCGATTACC AGATCGCCAC GCCGGGCATT GCCGCCACGG CACGCCGCGC GTCGATCTTC
AAGGACATCA AGTTCAGCGA CCACGCGCCG CTGACGATCG ATTACGACAC GAAGCCGCAC
TGGTAA
 
Protein sequence
MLRIISANLN GVRSAASKGF FDWMGKQDAD FVCVQELKCA QDDMTPEFLA PHGYHGVFQH 
AVKKGYSGAG LYTRHKPDEV IVGFDNGEFD AEGRYVEARY GKLSVISVYV PSGSSGEERQ
QAKFRFMDLF MEHLKDLRHE KGREVVLCGD VNIVHKEIDI KNWKGNQKNS GCLPEERAWL
TKLFDEVGYV DVFRTLDQRP EQYTWWSNRG QAYAKNVGWR IDYQIATPGI AATARRASIF
KDIKFSDHAP LTIDYDTKPH W