| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0027 |
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| Symbol | |
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| ID | 8017650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 31524 |
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| End bp | 33509 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644828811 |
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| Product | autotransporter-associated beta strand repeat protein |
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| Protein accession | YP_002980011 |
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| Protein GI | 241661651 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
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| TIGRFAM ID | [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCA CTGCCCGCCC CGCGTTTTCC CGCCCGCGTC TGTGGTTCAG CCTCGTTGCG
CTGTTCGGTG CCCTCGCGCT CACCGCGTGC GGCGGCGATG ACACCACCAG CAGCACGCCC
GTTGCCACCA CGCAGGCCAT TCCGGCGCCG CCCGCAGACC CGGGCTTTGT CGACACGGCG
GCCGTGGCCA CCGGCGTACC GGCCTTCGTC GACAACATCG CCACCAACCA GCGCGGCGAT
GCCCGCTACG CCACGCTGGG CACCAATGCC GGCGTGCGCC TGTTCACCCG CTTTCTGGAT
CTCTGGCAGC CGCTCACGGA AATCGTCGAT GCGGGCGTGA GTGCGCCAGC CAACGGGTCG
TTCCCGGCGG TCGTGGCGTC CACGTGGACG GGCCTGCCCA ACGACGGCAC GGCCGGCGGC
ACGCAGCTCA ATCTGCCGGT CTTGAACGCA AACGTTCAAT ACGTGGTGAA CGCCACCACC
AACCGCACGC AGGCCCAGGC CGACGCGGCG TACTTTGACG ACCGCCGCGG CAAGGGCTAC
AGCGTGAGCG ACGGCATGGG GCCGCTGACC ACCGCGTGGC GCACGCTGGC GCAGCAGACC
ACGTCGATTA CCACCGTGCC GGCCGATGCC ACCACCGTGC TCTACAACGA CAGCGGCAAC
AACACGGGCG TGGGCACCTC GGCCGGCAAC ACTGCCTTCG GCAAGGTGGT CGACCTGATC
AACACGGTGG GCAACAACGC CTCCACCGAG CCTTCCAAGC GCTTCTACAA ATACGCGCGG
CCGTACCGCT GGAGCAGCAG CGTGGTCGTC GTGCCGACGC TGGTGCCGGC CGAGAGCCCG
ACGCCCACCA CCGACGGCGG CTTCATCAGC GGCCATTCGG CCGAAGCCGT GCGCGATACC
GTGGCGATGG CGTACTTGGT GCCCGAGCGC TTCCAGCAGA TCCTGGCGCG CGGCATGGAG
CTGGGCGAGA ACCGCATCCT GGCCGGCATG CATTCGCCGC TGGATGTGAT GTCCGGCCGC
ATGATCGGCA TTGCCGCCGC CGCGGCCAAC CTCGTCGACC CGGCCAATGC AGCGCTCAAG
GCGGCCGCCT TCACGCAGGC GCACACCGCG CTGATGGCGC AGACCGGCAC GGATGCCACG
ACCTTCCCGG CGCTGGCCCA GTCCGGCACG CTGGCCACTG ATCGCTTTGC CGACTACGCC
ACCAACCAGG CCAACTTCAC GCGCCGCATG ACGTTTGGCT TCACGCAGAT CGGCGCGACG
ACGCTGGCGC CGGTGGTGCC CAAGGGTGCC GAGGTGCTGC TGGAAACGCG CTTCCCGTAC
CTGAGTGCTG ACCAGCGCCG CGTGGTGCTC AAGACCACCG AGCTGGCGTC CGGCTACCCC
GTGCTCGACG ACGCCGAAGG CTGGGGCCGC CTCAACCTGT TCGCTGCGGC CGACGGTTAC
GGCGCGTTCA ACGGCAACGT GATCGTGTCG ATGGATGCAA CGCAGGGCGG CTTCAATGCG
GCCGATTCGT GGCGCAACGC CATCTCGGGC CCTGGCAAGC TCACGCTGCA AGGCACCGGC
AGGCTGCGCC TGGCCGGCGT CAACACGTAC ACCGGCGGCA CCCAGGTCGC AGGCGGCGTG
CTGGAAGCCG ATTCGGCCAA TGCATTCGGT GCGGGCGACG TGTATGTGGG AGCCGGCACG
CTGGCGGTCA ACGCGCCGGC GGCGGTGGCC ATTGCGGGCA AGTTCACCCA ACTGCAGGGC
ACGACGCTCG ACCTCGCCAT CGGCCCGAAC GGCCAGGGCA AGCTGAGCGT GGCCGGCCTT
ACCACCATTG CGGGCGGCAC GCTGCACGTG AAATTCGTGA ACGGCTACAC GCCCAAGGTG
GGCGACACCA TCGCCGTGTT GGATGGCGCC GGCAGCAACC GGCAGTTCAC GTCGGTGGTG
GTCGACGGCT TCCAGGCCAC GGCCATCTAC ACGGCCACCG GCATCCAGAT CCACCTGGAC
GCCTGA
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| Protein sequence | MSFTARPAFS RPRLWFSLVA LFGALALTAC GGDDTTSSTP VATTQAIPAP PADPGFVDTA
AVATGVPAFV DNIATNQRGD ARYATLGTNA GVRLFTRFLD LWQPLTEIVD AGVSAPANGS
FPAVVASTWT GLPNDGTAGG TQLNLPVLNA NVQYVVNATT NRTQAQADAA YFDDRRGKGY
SVSDGMGPLT TAWRTLAQQT TSITTVPADA TTVLYNDSGN NTGVGTSAGN TAFGKVVDLI
NTVGNNASTE PSKRFYKYAR PYRWSSSVVV VPTLVPAESP TPTTDGGFIS GHSAEAVRDT
VAMAYLVPER FQQILARGME LGENRILAGM HSPLDVMSGR MIGIAAAAAN LVDPANAALK
AAAFTQAHTA LMAQTGTDAT TFPALAQSGT LATDRFADYA TNQANFTRRM TFGFTQIGAT
TLAPVVPKGA EVLLETRFPY LSADQRRVVL KTTELASGYP VLDDAEGWGR LNLFAAADGY
GAFNGNVIVS MDATQGGFNA ADSWRNAISG PGKLTLQGTG RLRLAGVNTY TGGTQVAGGV
LEADSANAFG AGDVYVGAGT LAVNAPAAVA IAGKFTQLQG TTLDLAIGPN GQGKLSVAGL
TTIAGGTLHV KFVNGYTPKV GDTIAVLDGA GSNRQFTSVV VDGFQATAIY TATGIQIHLD
A
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