Gene Rpic12D_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0026 
Symbol 
ID8017649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp30143 
End bp31291 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content69% 
IMG OID644828810 
ProductCBS domain containing membrane protein 
Protein accessionYP_002980010 
Protein GI241661650 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTT CATCCCTGCA TCCCGCCCTG CGCCGCTGGC TCCACAGCTT CATTCCTGCA 
CCCGTGACGG TGCGCTGGAG CGAGCGCGTC CGTTCCGCAG TCGGCGCCCT CGCCGGCATC
CTCTTTACCG GCACGATGAT GAAGATGGTG CCGGGCGCTT CCACGCTGAT CCCGCTGCTG
GTCGCCCCAA TGGGCGCCTC TGCCGTGCTG CTGTTTGCGG TGCCCGCCAG TCCGCTCGCG
CAGCCGTGGT CGATCATCGG CGGCAACCTG GTGGCGGCTA CCGTGGGCGT GACGTTCGCG
CTGCTGGTGA ATGATCCGGT GATTGCCTCT GCGCTGGCCA TCTCGGCAGC CATTGCCGGC
ATGTTCGCAC TGCGCTGCGT GCACCCGCCA TCAGGCGCGG TGGCGCTCAC CGCCGTGATT
GGCGGCCCGG CCGTGCATGC CCTGGGCTAT CGCTTCGTGC TGGAGCCGAT CCTGATCCAG
TCAGCGCTGC TGCTGGTCGG CGCACTGGTG TACCACGCGG CCACGGGCCA CCGGTATCCG
CACGCGCAAC GCCTGCCCGC TGCCGAGCGT CCGCCCACGG CGGCCGGCTT CACCCGCGCC
GACATCGTCG CCGCACTGCG CCGCCAGAGC GAGCTGCTCG ACATCGACCC CGAAGACATC
GAAGCCGTGC TGCGCGAGAT GCAACTGCAG GCCTACACGC GCACGTTCCA GGCGCTCACC
TGTGCAGACA TCATGACCGC GCCGGTGGTG ACGGTCTCGG CGGGCACGTC GATCCCGCGT
GCGCTGCAAC TGCTGCGCCA GCATGGTTTC AAGGCATTGC CGGTGGTGGA TGAGGGACGG
CGCGTGGTGG GCATCGTCAC GCGTGTCGAC CTGCTCGGCC TGGCACCGGC AGACCTGCGC
CAGACGTTGC GCCGCTGGTT CAGCATCGGC GCGCTCACCC CGCCGCGTGT GGCCGATCAC
ATGAAGACGC GCGTGCAGAC CATTGCCGCC AGTGCGCCCA TGTCGGATCT GGTGCCAATG
TTTGCCAGCG CCGGCCACCA CCACATTCCG GTGCTGGATG CCGACGGACG GCTGGCCGGC
ATCGTCACGG AATCCGACTT GGTGGGCGGG CTGTACCGTC AGGCCAACAT CGAGCCACAG
GCGGCCTGA
 
Protein sequence
MSSSSLHPAL RRWLHSFIPA PVTVRWSERV RSAVGALAGI LFTGTMMKMV PGASTLIPLL 
VAPMGASAVL LFAVPASPLA QPWSIIGGNL VAATVGVTFA LLVNDPVIAS ALAISAAIAG
MFALRCVHPP SGAVALTAVI GGPAVHALGY RFVLEPILIQ SALLLVGALV YHAATGHRYP
HAQRLPAAER PPTAAGFTRA DIVAALRRQS ELLDIDPEDI EAVLREMQLQ AYTRTFQALT
CADIMTAPVV TVSAGTSIPR ALQLLRQHGF KALPVVDEGR RVVGIVTRVD LLGLAPADLR
QTLRRWFSIG ALTPPRVADH MKTRVQTIAA SAPMSDLVPM FASAGHHHIP VLDADGRLAG
IVTESDLVGG LYRQANIEPQ AA