Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0026 |
Symbol | |
ID | 8017649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 30143 |
End bp | 31291 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644828810 |
Product | CBS domain containing membrane protein |
Protein accession | YP_002980010 |
Protein GI | 241661650 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCTT CATCCCTGCA TCCCGCCCTG CGCCGCTGGC TCCACAGCTT CATTCCTGCA CCCGTGACGG TGCGCTGGAG CGAGCGCGTC CGTTCCGCAG TCGGCGCCCT CGCCGGCATC CTCTTTACCG GCACGATGAT GAAGATGGTG CCGGGCGCTT CCACGCTGAT CCCGCTGCTG GTCGCCCCAA TGGGCGCCTC TGCCGTGCTG CTGTTTGCGG TGCCCGCCAG TCCGCTCGCG CAGCCGTGGT CGATCATCGG CGGCAACCTG GTGGCGGCTA CCGTGGGCGT GACGTTCGCG CTGCTGGTGA ATGATCCGGT GATTGCCTCT GCGCTGGCCA TCTCGGCAGC CATTGCCGGC ATGTTCGCAC TGCGCTGCGT GCACCCGCCA TCAGGCGCGG TGGCGCTCAC CGCCGTGATT GGCGGCCCGG CCGTGCATGC CCTGGGCTAT CGCTTCGTGC TGGAGCCGAT CCTGATCCAG TCAGCGCTGC TGCTGGTCGG CGCACTGGTG TACCACGCGG CCACGGGCCA CCGGTATCCG CACGCGCAAC GCCTGCCCGC TGCCGAGCGT CCGCCCACGG CGGCCGGCTT CACCCGCGCC GACATCGTCG CCGCACTGCG CCGCCAGAGC GAGCTGCTCG ACATCGACCC CGAAGACATC GAAGCCGTGC TGCGCGAGAT GCAACTGCAG GCCTACACGC GCACGTTCCA GGCGCTCACC TGTGCAGACA TCATGACCGC GCCGGTGGTG ACGGTCTCGG CGGGCACGTC GATCCCGCGT GCGCTGCAAC TGCTGCGCCA GCATGGTTTC AAGGCATTGC CGGTGGTGGA TGAGGGACGG CGCGTGGTGG GCATCGTCAC GCGTGTCGAC CTGCTCGGCC TGGCACCGGC AGACCTGCGC CAGACGTTGC GCCGCTGGTT CAGCATCGGC GCGCTCACCC CGCCGCGTGT GGCCGATCAC ATGAAGACGC GCGTGCAGAC CATTGCCGCC AGTGCGCCCA TGTCGGATCT GGTGCCAATG TTTGCCAGCG CCGGCCACCA CCACATTCCG GTGCTGGATG CCGACGGACG GCTGGCCGGC ATCGTCACGG AATCCGACTT GGTGGGCGGG CTGTACCGTC AGGCCAACAT CGAGCCACAG GCGGCCTGA
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Protein sequence | MSSSSLHPAL RRWLHSFIPA PVTVRWSERV RSAVGALAGI LFTGTMMKMV PGASTLIPLL VAPMGASAVL LFAVPASPLA QPWSIIGGNL VAATVGVTFA LLVNDPVIAS ALAISAAIAG MFALRCVHPP SGAVALTAVI GGPAVHALGY RFVLEPILIQ SALLLVGALV YHAATGHRYP HAQRLPAAER PPTAAGFTRA DIVAALRRQS ELLDIDPEDI EAVLREMQLQ AYTRTFQALT CADIMTAPVV TVSAGTSIPR ALQLLRQHGF KALPVVDEGR RVVGIVTRVD LLGLAPADLR QTLRRWFSIG ALTPPRVADH MKTRVQTIAA SAPMSDLVPM FASAGHHHIP VLDADGRLAG IVTESDLVGG LYRQANIEPQ AA
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