Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0018 |
Symbol | |
ID | 8017641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 20437 |
End bp | 21135 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644828802 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_002980002 |
Protein GI | 241661642 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC CCCGTGCTCC GACGCCCGCC ACGCAACTGG AAGGCCATGC GTGGTTCACC GCGCTTGCGC CTGAACACCA GGCCCTGGCC GCGCGAGAAA CCCTGCTGCA GGCCTTCGAG CCCGGCGCCT TCATTGCCCG CCGCGGCGAA CCGTCCCGCT ACTGGATCGG CGTGGACACC GGGCTCATCA AGCTGGCCGT GTACACCGCC GACGGGCGCG GCTGCACGTT CTCGGGCGTA CCTGCGGGCG GCTGGTGCGG CGAGGGCAGC GTCATCAAGC GCGAAGACCG CCGCTATGAC GTGATCGCCA TTCGCGCCTC GCACGTGCTG CTGGTGCCCG AACCCGTGTT CAATACGCTG CTCGCGCAGA GCTTGCCGTT TGCCAGCTTT GTGGTGCGCC AGCTCAACGA ACGCATGGGT CAGTTCATTG CCACCGTGCA GAACGATCGC CTGCTGAGCG CCGATGCGCG CGTGGCGCAA GCGATTGCGC AGCTGTTCCA CCCTGCCCTG TACCCGCGCA CGAGCACCGT GCTGGAGCTG TCGCAAGAAG AGATCGGGCT GCTGACGGGG CTGTCGCGCC AGCGCGTGAA CCGCGCGCTG CAACGGCTGG CCGAAGGCGG AATGATCGCG CTGTCATACC AGACCATTCG CGTGACCGAC CTCGAGCGGC TGCGGCTCTT CGGCCTGTCG GAGCTGTAA
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Protein sequence | MTTPRAPTPA TQLEGHAWFT ALAPEHQALA ARETLLQAFE PGAFIARRGE PSRYWIGVDT GLIKLAVYTA DGRGCTFSGV PAGGWCGEGS VIKREDRRYD VIAIRASHVL LVPEPVFNTL LAQSLPFASF VVRQLNERMG QFIATVQNDR LLSADARVAQ AIAQLFHPAL YPRTSTVLEL SQEEIGLLTG LSRQRVNRAL QRLAEGGMIA LSYQTIRVTD LERLRLFGLS EL
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