| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0003 |
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| Symbol | gyrB |
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| ID | 8017626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3723 |
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| End bp | 6251 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644828788 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_002979988 |
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| Protein GI | 241661628 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.267231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG AGCAGAAACC GCAATCCACC CCCGCCGAGG CCAACAGCTA TGACGCCGCC
TCGATCCAGA TCCTGGAAGG CCTGGAGGCG GTACGCAAGC GGCCGGGCAT GTACATCGGC
GACACCTCGG ATGGCACCGG CCTGCACCAC CTCGTGTTCG AGGTGCTGGA CAACTCCATC
GACGAAGCAC TGGCCGGGCA TTGCACCGAG ATCCAGGTCA CCATCCACAC GGACAACTCC
ATCTCCGTGA TCGACAACGG CCGTGGCATT CCGACCGGCA TCAAGTTTGA CGACAAGCAC
GAGCCCAAGC GCAGCGCGAC CGAGATCGCC ATGACCGAGC TGCACGCCGG TGGCAAGTTC
AACCAGAACA GCTACAAGGT GTCGGGCGGC CTGCACGGCG TTGGCGTGTC GTGCGTGAAC
GGTCTGTCGA AGTGGATGAA GGTGACGGTG CGCCAGGGTG GCAAGGTGCA TTACATCGAG
TTTGCACAGG GCGTTCCGCA AAACCGCCTG ATCGAAACGG TGCAAGGGCC GGACGGCCAG
ATGGTGGAGG TCTCGCCGCT GCGCGTGTTG GGCACCACCG ACAAGCGCGG CACCGAAGTG
CACTTCTTGG CCGACGAAGA GATCTTCACC AACGTCGAAT ACCACTACGA GATCCTCTCC
AAGCGGATTC GCGAGCTTTC GTTCCTGAAC AACGGCGTGC ACATCCGGCT GACCGACCAG
CGCACCGGCA AGGAAGAAGA CTTCGCCTTC TCGGGCGGCG TGAAGGGCTT CGTTGAGTAC
ATCAACAAGA ACAAGACCGT GCTGCACCCC ACCATCTTCT TTGCCGCCGG CGAGAAAGAC
GGCGTGGCCG TAGAAGTGTC GATGCAGTGG AACGACGCCT ACAACGAGCA GGTGCTCTGC
TTCACCAACA ACATCCCGCA GCGCGACGGC GGCACCCACC TCACGGGCCT GCGCGCCGCC
ATGACGCGCG TCATCAACAA GTACATCGCC GACAACGAGA TCGCCAAGAA GGCCAAGGTC
GATACCTCGG GCGACGACAT GCGCGAAGGC CTGACCTGCG TGCTGTCCGT CAAGGTGCCG
GAGCCCAAGT TCAGTTCGCA GACCAAGGAC AAGCTCGTCT CGTCGGAAGT GCGCCTGCCG
GTGGAAGAAG TCGTCGCCAA GGCGCTGAGC GACTTCCTGC TGGAAACGCC CGTCGACGCC
AAGATCATCT GCGGCAAGAT CGTTGAAGCC GCCCGCGCGC GTGAGGCTGC CCGCAAGGCC
CGCGAAATGA CGCGCCGCAA GGGCGTGCTC GACGGCATGG GCCTGCCCGG CAAACTGGCC
GACTGCCAGG AGAAAGACCC CGCGCTGTCA GAACTCTTCA TCGTCGAGGG TGACTCCGCA
GGTGGCTCGG CCAAGCAGGG CCGCGACCGC AAGTTCCAGG CAATCCTGCC GCTCAAGGGC
AAGATCCTGA ACGTCGAGCG CGCGCGCTTT GACAAGATGC TCTCCAGCCA GGAAGTGCTC
ACGCTCATCA CCGCCATGGG CACCGGCATT GGCAAAGACG ACTACAACCT CGACAAGCTG
CGCTACCACC GCATCATCAT CATGACCGAT GCTGACGTAG ACGGCTCGCA CATCCGCACG
CTGCTGCTCA CGTTCTTCTA CCGCCAGATG CCCGAGATCA TCGAGCGCGG CCACGTCTAC
ATCGCCCAGC CGCCGCTCTA CAAGATCAAG CACGGCAAGG AGGAGCGCTA CATCAAAGAC
GACGTCGAGA TGGCCGCCTA CCTCGTGCGC CAGGCGCTGG ACACCGCCGT GCTCGTGCGC
CCCGACGGCA CCGAGATTGC CGGCGACGCC CTGGCCGAAC TCGCACGCCA GTACCAGCTC
AGCCGCGGCG TGATCGAGCG CCTGTCTCGC GTGATTGACG CCGACGCCCT GCGCGCCATT
GCCGAAGGCG TGTCGCTGGA CTTGTCCAAC GAAGCCGCAG CCGAAGCCAG CGCCCGCACG
CTCAAGGCCC GCCTGCTCGA AATGCAAGGC AACGCCAGCA GCGCCAACGG CGGCGCCACC
GCAGACGCCT TCATGCAGTA CGACGAGAAG ACCGAGAAGT ACCGCATCAT GGTCGTCCGC
CGCCAGCACG GCAACCAGCG CCTGAGCCAC ATCGACGCCG ACTTTGTGGC CGGCGCCGAC
TACACCGCGC TCTCAAGCAC CGCCGCCACC TTCCAGGGCC TGATTGGCGA CGGTGCCAAG
GTGCGCCGCG GCACCGGCGA CAAGGTGCGC GAGCAGAACG TTGCCGACTT CCACGCCGCC
ATGACGTGGC TGCTGAGCGA AGCCGAGCGC GGCGTGAGCC GCCAGCGCTA CAAGGGCCTG
GGCGAAATGA ACCCCGAGCA GCTGTGGGAA ACCACCATGG ACGTCACCCA GCGCCGCCTG
CTGCGCGTGC AGATTGAAGA CGCCATTGCC GCGGACCAGA TCTTCACCAC GCTGATGGGC
GACGACGTGG AACCGCGCCG GAACTTCATT GAGAGCAATG CGTTGGTGGC GCGGAATATT
GATGTTTGA
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| Protein sequence | MTEEQKPQST PAEANSYDAA SIQILEGLEA VRKRPGMYIG DTSDGTGLHH LVFEVLDNSI
DEALAGHCTE IQVTIHTDNS ISVIDNGRGI PTGIKFDDKH EPKRSATEIA MTELHAGGKF
NQNSYKVSGG LHGVGVSCVN GLSKWMKVTV RQGGKVHYIE FAQGVPQNRL IETVQGPDGQ
MVEVSPLRVL GTTDKRGTEV HFLADEEIFT NVEYHYEILS KRIRELSFLN NGVHIRLTDQ
RTGKEEDFAF SGGVKGFVEY INKNKTVLHP TIFFAAGEKD GVAVEVSMQW NDAYNEQVLC
FTNNIPQRDG GTHLTGLRAA MTRVINKYIA DNEIAKKAKV DTSGDDMREG LTCVLSVKVP
EPKFSSQTKD KLVSSEVRLP VEEVVAKALS DFLLETPVDA KIICGKIVEA ARAREAARKA
REMTRRKGVL DGMGLPGKLA DCQEKDPALS ELFIVEGDSA GGSAKQGRDR KFQAILPLKG
KILNVERARF DKMLSSQEVL TLITAMGTGI GKDDYNLDKL RYHRIIIMTD ADVDGSHIRT
LLLTFFYRQM PEIIERGHVY IAQPPLYKIK HGKEERYIKD DVEMAAYLVR QALDTAVLVR
PDGTEIAGDA LAELARQYQL SRGVIERLSR VIDADALRAI AEGVSLDLSN EAAAEASART
LKARLLEMQG NASSANGGAT ADAFMQYDEK TEKYRIMVVR RQHGNQRLSH IDADFVAGAD
YTALSSTAAT FQGLIGDGAK VRRGTGDKVR EQNVADFHAA MTWLLSEAER GVSRQRYKGL
GEMNPEQLWE TTMDVTQRRL LRVQIEDAIA ADQIFTTLMG DDVEPRRNFI ESNALVARNI
DV
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