| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5092 |
|---|
| Symbol | |
|---|
| ID | 8017381 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | + |
|---|
| Start bp | 383407 |
|---|
| End bp | 384027 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644828780 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002979980 |
|---|
| Protein GI | 241589955 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.300495 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACA CACCGATGAA CGATCAGAAG CCGGAAACGG TATCGTGCGT GCTGAGCATC
GATCCGGCCA AGGAAAAAAT CACTGCGGTA CTTCCCGCCG GCGCCACAAT CGAGGGGTCG
CTAAGGCTGA AGGAAGGTGG CCGAATTGGA GGTGTCGTCA AGGGGAACGT CGTCAGTGAG
TCAGGAACGT TGCTGATCGA TTCCAGTGCC ATTGTGGAAG GCGATGTGGT GGCCAGGGGC
CGCTGCATTG TCCTCGGCCA GGTTGGCACG TCCTCCCACC GCACCACGAT TCGCTGTGAG
AAGGTCGATG GTCTGACGAT CAGCCACGCC GCTCAGATCC ACGCGAACAT TGAGCACAAT
GGGATTTCGG CGACAAATGT GAGCGGGCAG ATTCAACGGA TTGCCGATAT GGCGCAGCCG
CATGCCCTCC CTCCTGCTGC CGAGTGGCGA GCACCCGGGC AAGACCTCCA TCTTGAAGAT
CTTCCCAGCA CGCAGCCGCC CGCGCTGACC CACGATCCGT CTCCGGTGGC CAACTTTACT
CAGCCGCCGG CACAAGCTCA ACAGACACCC GCGCTACGGG TAGTCATCTC GGATACACCG
CAGGTCGCGG CAGTAGGTTG A
|
|---|
| Protein sequence | MNNTPMNDQK PETVSCVLSI DPAKEKITAV LPAGATIEGS LRLKEGGRIG GVVKGNVVSE
SGTLLIDSSA IVEGDVVARG RCIVLGQVGT SSHRTTIRCE KVDGLTISHA AQIHANIEHN
GISATNVSGQ IQRIADMAQP HALPPAAEWR APGQDLHLED LPSTQPPALT HDPSPVANFT
QPPAQAQQTP ALRVVISDTP QVAAVG
|
|---|
| |