Gene Rpic12D_5062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5062 
Symbol 
ID8017351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp354737 
End bp355393 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content59% 
IMG OID644828750 
Productputative transcriptional activator, TenA family 
Protein accessionYP_002979950 
Protein GI241589925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.66393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACG AATTCATCGA CTCGCTCAGC GCCACGGTCA ACCAAGGTTG GGAGGCCATC 
AAGCAAGGCC AGTTCTGGCA GCACGTGCTG AATCGCCCAG TTACACGCGA GTTCTATCAC
GACCTGATGG TCGAGATTTA CCACTACACA CGGCACAACT CCATGAACCA GGCGGCAACC
GCGTTTGTCG CGGCCCCCGA AGGGCTGCTC AAATTCGCCT ACCACCACGC AGCCGACGAA
TTGGGGCATG AGCGCATGGT GACGCACGAT TTGGAGAGCA TTGGCCTGCT GGACCGGCAA
GTCTTGAACC GAGCGCCGCT GCCCGCCACT GAAGCCCTGA TCGGCTACCT GTATTTCGTG
GCGCTCAAGT ATGGCCCGAT CGCCCGGCTC GGCTACAGCT TCTGGGCCGA AGACGCCTAC
GAACACATCG ACGACGTGCT GCGCAAGATC AAGGGCGATC TGTCGCTGAC GGACAAGAAC
ATGTCGTTCT TCGTTGCGCA CGCCAGCATC GATGAGAAAC ACAGCGCCCA AGTGCACGCG
TGCATCGAGC GCTATGCCAC CACGCCCAAC GACCAGGCCC TGATCCGCAC TGTGGCACAA
ACCACGCTTT TCCTGACCGG ACAGATGATG GAGCAGGTTG CCCAACTCCA TCGCTGA
 
Protein sequence
MKNEFIDSLS ATVNQGWEAI KQGQFWQHVL NRPVTREFYH DLMVEIYHYT RHNSMNQAAT 
AFVAAPEGLL KFAYHHAADE LGHERMVTHD LESIGLLDRQ VLNRAPLPAT EALIGYLYFV
ALKYGPIARL GYSFWAEDAY EHIDDVLRKI KGDLSLTDKN MSFFVAHASI DEKHSAQVHA
CIERYATTPN DQALIRTVAQ TTLFLTGQMM EQVAQLHR