Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5062 |
Symbol | |
ID | 8017351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 354737 |
End bp | 355393 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644828750 |
Product | putative transcriptional activator, TenA family |
Protein accession | YP_002979950 |
Protein GI | 241589925 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.66393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAACG AATTCATCGA CTCGCTCAGC GCCACGGTCA ACCAAGGTTG GGAGGCCATC AAGCAAGGCC AGTTCTGGCA GCACGTGCTG AATCGCCCAG TTACACGCGA GTTCTATCAC GACCTGATGG TCGAGATTTA CCACTACACA CGGCACAACT CCATGAACCA GGCGGCAACC GCGTTTGTCG CGGCCCCCGA AGGGCTGCTC AAATTCGCCT ACCACCACGC AGCCGACGAA TTGGGGCATG AGCGCATGGT GACGCACGAT TTGGAGAGCA TTGGCCTGCT GGACCGGCAA GTCTTGAACC GAGCGCCGCT GCCCGCCACT GAAGCCCTGA TCGGCTACCT GTATTTCGTG GCGCTCAAGT ATGGCCCGAT CGCCCGGCTC GGCTACAGCT TCTGGGCCGA AGACGCCTAC GAACACATCG ACGACGTGCT GCGCAAGATC AAGGGCGATC TGTCGCTGAC GGACAAGAAC ATGTCGTTCT TCGTTGCGCA CGCCAGCATC GATGAGAAAC ACAGCGCCCA AGTGCACGCG TGCATCGAGC GCTATGCCAC CACGCCCAAC GACCAGGCCC TGATCCGCAC TGTGGCACAA ACCACGCTTT TCCTGACCGG ACAGATGATG GAGCAGGTTG CCCAACTCCA TCGCTGA
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Protein sequence | MKNEFIDSLS ATVNQGWEAI KQGQFWQHVL NRPVTREFYH DLMVEIYHYT RHNSMNQAAT AFVAAPEGLL KFAYHHAADE LGHERMVTHD LESIGLLDRQ VLNRAPLPAT EALIGYLYFV ALKYGPIARL GYSFWAEDAY EHIDDVLRKI KGDLSLTDKN MSFFVAHASI DEKHSAQVHA CIERYATTPN DQALIRTVAQ TTLFLTGQMM EQVAQLHR
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