| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5056 |
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| Symbol | |
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| ID | 8017345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | - |
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| Start bp | 338907 |
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| End bp | 341450 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644828744 |
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| Product | filamentous hemagglutinin family outer membrane protein |
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| Protein accession | YP_002979944 |
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| Protein GI | 241589919 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01731] adhesin HecA family 20-residue repeat (two copies)
[TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.776969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCCTA CATATCGTCA GGCGAATCTG GATGTTCTGG TCGGCCTGTG CCTTGTCTCA
ATGCCCCTAA TTGTTAGCGC CGCCGGTATC GTCACCGACG GCGGCACCGC TACTTCTGTC
ACGACCAGCG CATCGGGCCG CCAAACCGTC AACATCGCTC CGAGCGTTGC CGGCGTCTCG
CACAACACCT ATTCATCCTT CAACGTCGTC ACAGCGGGCG CCGACCTGAA CAACACCGCT
GTCGCCGCCC GAACGATTGT CAACCAGGTC ACGAGCACCA ACCCGTCGCT GATACAGGGC
AACATCGCTG TGCTGGGCCC GCGCGCCAAC GTGATTCTGG CCAACCCCAA CGGCATTACC
GTGGACGGCG GCTCGTTCAC CAACACCGGC AACGTGGCAC TCACCACCGG CCAAGTGTCG
TTCAACGATT TCACCAACGG CGCGGGGCAA CTCCAGCGTA ACGTGGTGCT CAATACCACT
TCCGGCGCCA TCAATATCGG CCCGGGTGGC CTAGCCGGCA CGATGCTCAA CCTCGAGCTT
ATCGCCAAGC AGGTGCGTGT GGCGGGTGCC GTGCAAAACA ACTACTCGGA CCCTAACAGT
CGTGTGCGCA TCGTCGCTGG AGACAGCCGT GCCGAAGTCG ACACGAGCGT CTCGCCAACC
GACAACCTGG ACCCCTGGAT CAGTTACAGC AGCACGGGCA CCGGCACACC GCTCGGCTAC
GCGATCGACA TTGCCTCGGG TGGCTCACTA GCGGGCGGCC GAATCGAACT GGTGGCCACC
GATCAAGGCG CAGGGGTGCA CCATGCCGGA GGCGCGTTCG CAACCGCAGG TGACTTCGTC
GTCAGCGGCT CGGGCGACCT GCAGCTGGCC GGTGGTACCG CGCAGGCAGC GAACGACGTG
TTGATCAACT CGGCCGGGTT GACCGGCAAT GGCTCATTGT CGGCCAACCG CAATATCCAG
ATCGCGTCCG GCAAAGTCCA CCTCGACAAC AGCACCGTGT CTGCCGGCAC TAGCAGCCAG
ACCGGCAGCA TCATCGTCGG CAGTGCAGGG CAGGTTCACA CCGAGCCCGT AACCATTGAC
CACACCACGC TGAAAGCCAC AGGTGGGGTC GGGATCAACG ATGCCGGCCC CGGCGTCTCG
ATGACGGGCT CTCAACTGAC TGCTACCCAG AACGTCGTCG CGAATGTGGC TTCCCTGTCG
CTCAACGCCG ACGGCACAGG CCAGACGCAA TGGACGTCGC AACAAGGCAC CATCGCGGTG
ACAGCACCTG GCGTCGTCGA ACTGACCGGC AGCAAGATCG ATGGCGTGGG CGGCACCTCG
ATGCAGGCTG GCTCGATTGC ACTCGCATCC AGTAACGGCA ACGCCAGCAC GGTGCAATCG
TCGGGCGGTG ACGTAGCACT GAACGCCGCC GGCACCTACA GCCAGACCGA TTCGAGCGTC
ATCGCCGCCG GCAACACGAC CTTGCACGGT AGCAGCGTCA CCATTGCATC GTCAGCACAG
CCCGCCACGG TCGCAGCGAT CAATGGCGGA GTGTTGATCC AGAGCGACGC CGATCTGACC
AACTCCGGCG GCCTGATCCA GGGCAAGACA CGCAACGCGA GCCAAGCGGC GTCCGAAGGT
GCCGTCACGC TGGCCGCAGG CGGCACGATC CGCAACGACG CCACTGCCAC CACACAGGGC
ATCGTATTCG GCCAGAGAGA CGACGTGGTG CTGCGCGCTG GTGGAGATAT CGTCAACCAC
CAGAGCCGTA TCCTCTCCAA TGCCAAACTG ACTCTGGCGG CCCAGGGCGA CGTGCAGAAC
CTGCTCGACA AATCCACCGG AGCCAATGGC GAGCAGCCGA CTGCCTGGAC GAGCAGCGGC
ACGCGCTGGC TGATCCTGCG CAACCACAGT TCCGGCTTTG ACGTCGACTA CGGCAGCATC
CCCACGACGG GTCAGGTGCC GTACCTCGTG TCGCAGACGG GCACCACGAT CAGCGGGCGC
AACGTCAGGA ACATCGGCGG CCAAATTTTG GCGAACGGTA CGGCGGACAT CGCCATCACC
GCCGCCAATA CCTTCCACAA CGAAACGCTG GCTACGGGCA GCGCGCACTT TTATCGTTCG
TGCATGATCT TCTGCCGGGA GAGCGCATCC AGCACGGTGA CGACTACGGG CGGGGCCATT
TCTGCCGGCG GCAACCTGAC GATCAACGCC GGGACACTCG CCGAGAACAT CGGCGGGCAG
GTTCTTTCGG TTGGCAACCT GACAGTCACC GCGCCTAAGG TCCGCGCGGT CGGCATCACG
GGGTATACGG CGCTCGCGCG TGATCGCGGC TTCAAGGTAT TCTTCGGCGA TACGTGGGCA
CGCCTTTATG CGGCTGACGT CGGCGGCAGT TGGCTTGCCA TGGGTGGAGC ACTCACCATC
AACGGGCTAG GCCAGATCGA AGGCGGCAGC TTTGACGGCC AAACTGTGGC CGCCAGCAAT
GGCATCACGA CCGTGCGCGC TAAATCCCGA GAGCCGGTGT CGATCGAATC TCACGTCGGT
CTGACCTCGT GGCTGTGGCA TTGA
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| Protein sequence | MLPTYRQANL DVLVGLCLVS MPLIVSAAGI VTDGGTATSV TTSASGRQTV NIAPSVAGVS
HNTYSSFNVV TAGADLNNTA VAARTIVNQV TSTNPSLIQG NIAVLGPRAN VILANPNGIT
VDGGSFTNTG NVALTTGQVS FNDFTNGAGQ LQRNVVLNTT SGAINIGPGG LAGTMLNLEL
IAKQVRVAGA VQNNYSDPNS RVRIVAGDSR AEVDTSVSPT DNLDPWISYS STGTGTPLGY
AIDIASGGSL AGGRIELVAT DQGAGVHHAG GAFATAGDFV VSGSGDLQLA GGTAQAANDV
LINSAGLTGN GSLSANRNIQ IASGKVHLDN STVSAGTSSQ TGSIIVGSAG QVHTEPVTID
HTTLKATGGV GINDAGPGVS MTGSQLTATQ NVVANVASLS LNADGTGQTQ WTSQQGTIAV
TAPGVVELTG SKIDGVGGTS MQAGSIALAS SNGNASTVQS SGGDVALNAA GTYSQTDSSV
IAAGNTTLHG SSVTIASSAQ PATVAAINGG VLIQSDADLT NSGGLIQGKT RNASQAASEG
AVTLAAGGTI RNDATATTQG IVFGQRDDVV LRAGGDIVNH QSRILSNAKL TLAAQGDVQN
LLDKSTGANG EQPTAWTSSG TRWLILRNHS SGFDVDYGSI PTTGQVPYLV SQTGTTISGR
NVRNIGGQIL ANGTADIAIT AANTFHNETL ATGSAHFYRS CMIFCRESAS STVTTTGGAI
SAGGNLTINA GTLAENIGGQ VLSVGNLTVT APKVRAVGIT GYTALARDRG FKVFFGDTWA
RLYAADVGGS WLAMGGALTI NGLGQIEGGS FDGQTVAASN GITTVRAKSR EPVSIESHVG
LTSWLWH
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