| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5048 |
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| Symbol | |
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| ID | 8017337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | + |
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| Start bp | 328124 |
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| End bp | 329317 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644828736 |
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| Product | integrase family protein |
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| Protein accession | YP_002979936 |
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| Protein GI | 241589911 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.414068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCATC CCGTTCCATC GTTCAACGGT CCCGCGGTGG CCATCGAGCA GTTGCGCATC
CCGCCAGCGC TCTCGGGCCT TCACGGCGCC AACCGCGCAC GCGAAGCGAG CCGCCAAATC
ACGGCGGATG ACGACCTGGC CGCCGTGGCT GCGTGGCTCG CCCGCTATGC CGGCGTGCCC
GGCACGGTCG CCACCTACCG CAAGGAAGCC GAACGCCTGA TACTGTGGGC GATTCTCCAG
CACGGCAAGC CGCTGTCTTC ACTCACCCAC GAGGACCTGC TGCTCTACGA GCGCTTCCTG
GCCGACCCGC AGCCAGCTTG GCGTTGGGTG ATGGCCTCAC GCAAGAAGCT GGCGAGAAGC
TCGCCCGACT GGCGCCCCTT CGCCGGTCCA CTGTCGCCCA CGAGCGTGCG GCATGCGATG
ACGATCCTCA ACGCGCTCTT CGCCTGGCTG GTGCAAGCCG GATACCTCGC CGGGAATCCG
CTCTCGCTCG CGCGCCGTCG CAGCGCCAAG ACAGCCCCGC GCGTGACGCG CTACCTCACG
CATGCGCATT GGGACATCGT CAAAGCCACG ATCGAAACCC TGCCCGTCGC GACGGAACGC
GACCGGCTGC ACGCGGCCCG TTGCCGGTGG TTGTTCTCCG TGCTGTATTT GGCCGGCCTG
CGCTTAGCGG AAATCGCCTC CACGCGCATG GGCGCCGTGT TCTCTCGCCG GGACGCGGCG
GGCGTCGAGC GCTGGTGGAT CGAGGTGCAC GGCAAAGGCG GCAAGACGCG CCTGGTGCCC
GCCACCGATG AACTGATCGC GGAGCTGGCG CGCTATCGGC GCATCTGCGG CCTGCCGCCG
TCACCGCAGA TCGGCGAAAC ACGCCCTTTG CTGCTGCCCG TGATCGGCCC GGAAAAGCCG
TTATCGCGCG CGGCGATTCA CCTGATCGTC AAGGAGGTGT TCAAGCTCGC GGCCGACCGC
GTGCGTGCAC AGGGTCCCGA GTTTGGCGCG CAGGCTGACG TGCTCGCCAG CGCATCGTCC
CACTGGCTGC GCCACACGGC CGGCTCGCAC ATGTCCGACC AACAGGTGGA CCTGCGCTTC
GTGCGTGACA ACTTCGGCCA TGCGTCGCTC GCCACGACGA GTGTCTACCT CCACGCGGAA
GATGACGCAC GCCACCAGGC AACGCAAGCC AGCCACCGGC TTGGCTGGAA CTGA
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| Protein sequence | MTHPVPSFNG PAVAIEQLRI PPALSGLHGA NRAREASRQI TADDDLAAVA AWLARYAGVP
GTVATYRKEA ERLILWAILQ HGKPLSSLTH EDLLLYERFL ADPQPAWRWV MASRKKLARS
SPDWRPFAGP LSPTSVRHAM TILNALFAWL VQAGYLAGNP LSLARRRSAK TAPRVTRYLT
HAHWDIVKAT IETLPVATER DRLHAARCRW LFSVLYLAGL RLAEIASTRM GAVFSRRDAA
GVERWWIEVH GKGGKTRLVP ATDELIAELA RYRRICGLPP SPQIGETRPL LLPVIGPEKP
LSRAAIHLIV KEVFKLAADR VRAQGPEFGA QADVLASASS HWLRHTAGSH MSDQQVDLRF
VRDNFGHASL ATTSVYLHAE DDARHQATQA SHRLGWN
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