Gene Rpic12D_5029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5029 
Symbol 
ID8017456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp313033 
End bp313731 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content54% 
IMG OID644828717 
Producthypothetical protein 
Protein accessionYP_002979917 
Protein GI241589892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0740685 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAG TCGCGCGTCT CGTCGAAGCC AGAAGTTACT CCCCCGAGGA GTTGAAGCAG 
GCTGAGCACA AGATCCAGGT CGCATCACAC GCAATAGCAG CGCGCGTCGC CCGTGATGGG
CGCCACGGAC TCTGCGTCGT CGCATCGGGA GTCTTATCTC GAATCCTCGA TGAACTTGGC
GTGTGGAACT ACACCGCAAA GAGCAACCTG ACCATTCACT TCCCGAGATC GGTATCGCTC
GAGCCGCAAT ATTTTTATTC GTTCGATGAG GGCAACTTCA CCGCTCCGCA CGCTATTGTG
GTGGCGCCTC CATTCGCAGT TGTCGATGTC ACAGTGAAGT ACCAACCGTA CGACAAGGTT
TCGATGGCCC AATTCTTACC GCATGTTGCG GCCACGAAAG AATTCCGACC GTACCGGGTG
ACTACCACCG AATTGGCCTC ACCTGACGTC AGGGCGTATC TAAGACACAT CGGTATGACA
GTCGAGACCT TCTTGGCGCT CGAAAGGGCC GACATGCTGG AGCTTATGAA GCAGTTGCCA
TCTAGAGAGA TTTCTCTCGA TGGTGGACGC CTCGGTTACG GCATCGTAGG CGTTGGTGGG
TACCAGGAAC AACTACGAGA ACTACTGTAC GAGAACAACA GAATCGACGG GATGTTGCCA
ATCGAGATCT TTGAGCAGGA CGTGCTCCCA AATATCTGA
 
Protein sequence
MNQVARLVEA RSYSPEELKQ AEHKIQVASH AIAARVARDG RHGLCVVASG VLSRILDELG 
VWNYTAKSNL TIHFPRSVSL EPQYFYSFDE GNFTAPHAIV VAPPFAVVDV TVKYQPYDKV
SMAQFLPHVA ATKEFRPYRV TTTELASPDV RAYLRHIGMT VETFLALERA DMLELMKQLP
SREISLDGGR LGYGIVGVGG YQEQLRELLY ENNRIDGMLP IEIFEQDVLP NI