Gene Rpic12D_5028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5028 
Symbol 
ID8017455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp311815 
End bp312963 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content58% 
IMG OID644828716 
Producthypothetical protein 
Protein accessionYP_002979916 
Protein GI241589891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.230407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCA CCGCGTATTC AAGGGAGGCG CGGCGAGAGC TCGATCTAGA GCAATGGCTC 
GCGCTCAATG CATACCAAGC CAAAGATGAT CCTGAACTGG CCATGATGCC GTCTGAGGTT
CGCGCGAAAG CGGCAAGTGA CATTGAGTGC AGCTGCTGTG GCGCGCAAGG TGCGACCCTA
GTCAGAGGCG CACGCTCGAA AAGTACTGGA AAGGCGATCG CGCAAGGACA TTTTCGCTTC
CGAACGGCTG ATGGCTCGAA CCCGCACAGC CCATTGTGCG ACTACTTCGA CGAGCATAAG
GTCCGAGGCG CGGAGTACCT GACCAATTTC GCAAGCGACA AGTCAGCTCT CACCCGCGCG
ATTCGTGATC TAGTTTGCCG AGGCATCACT GCTGGGCTCT TCAGCCAGGC AGATATGCGC
GAGATGCGGC TGTGGTTCCT GCAGGAGAAG GTGGCTCATG CCGCACCGCT TGATGTCACG
GCTGAACTGC TTGAGTGGTG TGTGGATATG CATGCGGCGC GCGGGCCGTG GAGCCGGGGA
AACTTGCCGT TTGAACCAGA GCATGGCTCA TTGCCAGGGT TTGACTGGGA ATTGGCTGCA
AAGCTTGAAT GGGCTCGTCG CAACTCGCGT CTGATCGACC TCGGTGAGCG CTGGGCGTTC
TACCGACACC AATCGATCGA GCGTCCGTTA CGCTTGTTGG CACAGCATGC CGGTGAGATC
GTGCTGGACC CGACTTGTCT ACAAGACAAG TACGAGGCGG CCTGTAAGCT AGCCAGTTTC
GCCGCAACCT TCCTCTTTCT ACCGGGGACT CCGCCGCCAC CGATTGTTCA CAAGCATCCC
AGCGACTGGG GGCCGACAGG ACACGCACTA CTAGCACTTA GCGCGTTGCT CCTCTACAAA
TCGGGATGGG ATCTGCAGCG CGCAAGTGCA CTCTACTGTC GACTCAAGGT TCTTCCACCC
TTGCCAAATG GTCTTGACGG AAATCTGATT GGCTTGAACC CATTCCACGA CTATGCGGCG
TGGCAAGTCA TCAATTCAGC TCGCCTTGTG GCTGCTGCGA GAACTGACGT CCGCTCAGTA
AAGGAGCAGG TGGCCGGCGT GAAAGATGAG CTTTATGGCA GGTATCGAGA CTGGGCCAGC
AGCAAGTAG
 
Protein sequence
MPITAYSREA RRELDLEQWL ALNAYQAKDD PELAMMPSEV RAKAASDIEC SCCGAQGATL 
VRGARSKSTG KAIAQGHFRF RTADGSNPHS PLCDYFDEHK VRGAEYLTNF ASDKSALTRA
IRDLVCRGIT AGLFSQADMR EMRLWFLQEK VAHAAPLDVT AELLEWCVDM HAARGPWSRG
NLPFEPEHGS LPGFDWELAA KLEWARRNSR LIDLGERWAF YRHQSIERPL RLLAQHAGEI
VLDPTCLQDK YEAACKLASF AATFLFLPGT PPPPIVHKHP SDWGPTGHAL LALSALLLYK
SGWDLQRASA LYCRLKVLPP LPNGLDGNLI GLNPFHDYAA WQVINSARLV AAARTDVRSV
KEQVAGVKDE LYGRYRDWAS SK