| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5024 |
|---|
| Symbol | |
|---|
| ID | 8017451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | + |
|---|
| Start bp | 309073 |
|---|
| End bp | 309816 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644828712 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002979912 |
|---|
| Protein GI | 241589887 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.541347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATTG ACATGATCTG TACCCAAGTT GGGGGTGTTG GCGGATCGCT TCGTTTGGAG
CACGCCATTC TTTTGTACTC GGGCAGGACC GAGGGCGGCC GGGACGGCCT TGTCACGATC
AATCCTGTAC GGATCGTTGG TGACGATGCA GTTATTGCGC CAGGCCAACC GGCCAGCAAG
GCCGCCCTTG TCCACGCGCT CGACCATCTG GCCGATCGTT CGAGCTCGCG CTCGCTGATT
CATCCGCGTG TCCTCGGTAA GGGGCCGGAC TATCTGGTCT GGTACACCCC GCCGGGAATT
CGGCACGTGG CTTTTCGGCA CACGAGCTTT GGTGGCGAGA AGGCAGCGAG CTGCCCGCTA
CCTGGCCTCG TTTTCATGGT CAGAAGTGAG GGCTGGTACG TCTTCGCTTA TGCGGGGAAG
CGTAGGCCAA CGGAGAAGAC ACGGCTGCTG CGCAGTCCGT TCTTCAACGT TTGGGAGGCG
GGGCGTATCT GCGTCGGGAA CATCGATCTG CCTAAACAGC GGGTCGAGGC TCCGGTCGAG
CAGTGGGAAG ACGCGTTTTT CGGGACGTGG TTCACGCATC CGAACGTGCC GCAGGACCAA
CTCCTGAAGA AGGGGGCCAA CCCGTTTAGC CTCTGGAAGG AACTGATGCG AGGTAAGCAT
CAAGCCTTCC CGTCTTCAAT CCTGAAGCCG GCCGGTGCAA CGCTGGGGGA GATGTTTGAG
AAGCTGATTG GAGGGGACGA GTGA
|
|---|
| Protein sequence | MVIDMICTQV GGVGGSLRLE HAILLYSGRT EGGRDGLVTI NPVRIVGDDA VIAPGQPASK
AALVHALDHL ADRSSSRSLI HPRVLGKGPD YLVWYTPPGI RHVAFRHTSF GGEKAASCPL
PGLVFMVRSE GWYVFAYAGK RRPTEKTRLL RSPFFNVWEA GRICVGNIDL PKQRVEAPVE
QWEDAFFGTW FTHPNVPQDQ LLKKGANPFS LWKELMRGKH QAFPSSILKP AGATLGEMFE
KLIGGDE
|
|---|
| |