Gene Rpic12D_5003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5003 
Symbol 
ID8017430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp290055 
End bp290573 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content60% 
IMG OID644828691 
Producthypothetical protein 
Protein accessionYP_002979891 
Protein GI241589866 
COG category[S] Function unknown 
COG ID[COG3236] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02464] conserved hypothetical protein, ribA/ribD-fused 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.468369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAGA TCCTAGGAAT GACACTGTTC TTCGGTGCCG AAGATGCCTT GAGCAACTGG 
CATCCGGCAC GGTTCACGTA CCGTGGCGTC GAATTCTCGT CAGTCGAGCA GTTCATGATG
TACTCGAAGG CGCGACTGTT CAACGACGAC CAGACCGCGA GGAAGATTCT GTCTGCTTCC
GAACCGCGTG AACAAAAGCG ACTCGGCCGC GAGGTCCGGG GATTTGACGA AGCAGTCTGG
ATCATCAAGC GTAAGCCGAT CGTGACCGTT GGCTGCCGTG AGAAGTTCTG GCAGAACCAA
CCTCTTGGCG AGGTTTTGCT CGGGACGGAC GATACCCTGC TGGTGGAAGC CAGTCCCTAC
GACCGGATCT ATGGTGTGGG TCTCGCCTGG AATGACCCGA GGATCCGGGA CGTGAGCCAG
TGGCAGGGCC TGAACCTGCT CGGTGAAGTC CTGATGGAGG TTCGCACCTG GCTGCCGAAA
GCCGGTGCGC TGGCGGCCGG CACGGTCACT GCGCACTAG
 
Protein sequence
MHEILGMTLF FGAEDALSNW HPARFTYRGV EFSSVEQFMM YSKARLFNDD QTARKILSAS 
EPREQKRLGR EVRGFDEAVW IIKRKPIVTV GCREKFWQNQ PLGEVLLGTD DTLLVEASPY
DRIYGVGLAW NDPRIRDVSQ WQGLNLLGEV LMEVRTWLPK AGALAAGTVT AH