Gene Rpic12D_4991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4991 
Symbol 
ID8017418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp282573 
End bp283121 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID644828679 
Productprotein of unknown function DUF1643 
Protein accessionYP_002979879 
Protein GI241589854 
COG category[S] Function unknown 
COG ID[COG4333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0525726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.369909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGAGC CTGTGAACGC ATCAATTCCA GCATGGACCG AGCAAAACGC CTACTTTTCC 
GGCGAACGGC ATCGAGTATG GCTGCGACGT CAACTGAGCA TGTTCGGCGT TCCAGTCGCG
TTCATTCTGC ACAACCCCAG CACGGCTGAT GCGATAGACA ACGATCCGAC GGCCCGGCGG
GGAGTCGGGT TTGCTAACGC GCTCGGTGCC AGCGACCTAG TCATCGTGAA CGCCGCTACC
GGAGTAGCGA CTGACGCGAA CGAGCTTGCA CAAATGGAGG ATCCAATCGG ACCAATGGCC
GATGAGGCGC TGCAGGTTGC TGCCGAGTTC TGTCTGTCAC GTGGTGGCGT CCTAATTGCA
GCATGGGGTG CCCCGAAAGG TAAGGCGAGC ACACGGCGCC TGATGGACGC GAGGTTCAAC
CACATTCTCC GGCTCAATTT GCCGTTGCAC GCCTTGCGAA TTACCTCCTC CGGATACCCC
GAACACCCTT TGTACTTGCC TGCCGATCTG CGCCCCGTGC CGTGGCGCTA TTCCATCCCT
GCTGCCTGA
 
Protein sequence
MREPVNASIP AWTEQNAYFS GERHRVWLRR QLSMFGVPVA FILHNPSTAD AIDNDPTARR 
GVGFANALGA SDLVIVNAAT GVATDANELA QMEDPIGPMA DEALQVAAEF CLSRGGVLIA
AWGAPKGKAS TRRLMDARFN HILRLNLPLH ALRITSSGYP EHPLYLPADL RPVPWRYSIP
AA