Gene Rpic12D_4990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4990 
Symbol 
ID8017417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp281244 
End bp282398 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content62% 
IMG OID644828678 
Producthypothetical protein 
Protein accessionYP_002979878 
Protein GI241589853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0260341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.128556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TGACTTTGGC GTCGCTGGCT GTTGTTGCAC TGCTGTCGGC GTGCGGTGGT 
GGTGGCGACG GCTCGGCATC GGGCAACGGT GGTTCCGACG GCACTGGCAC CGGGCCGGTG
GGTACGCAGA AGACGCCGGT GAACCCGTAC ACGGGCCAAG CGGCACCCGG CGCAAAAACG
ACCGCCGTTA CCGGCCAAGT ATTCAACAGC GGCGCGACGG CTGGCGCAAC GGTGACGGCC
TACGTGCTGA ATGCGGATGG CAGGAACGGG ACCGTGATCG GTACGGCTAC CTCGGCTGCG
GACGGTACGT TCAGCATGAC CCTGAGCCAA GCGCCGTATG ACACTGCCAG CTTCGTGCGC
TTCGTGGCAA CGGGGGGCAC TTACACGTCC TCTGCTGACC ATACGGTTCA GACCAACGGT
ACGCTGGAAC TCGTCACCCC GTACATTACG ACGCAGTTCA ACAACTTCGT CATCACGTCC
CTGACGCATG TGGCGTCGCA ACGTATGGCA CAAGTCGCGT CGGGCGGCGG GTCGATTGCA
ACTGCCTATA CGACTGGTGC TGGCATGGTT CTGTCGCTGA TCGGCTTCAC CAACGCAATC
CTTCCGAGCG ACCAGAGTGC GGGCGTGAGC TACCTCGCAC TGGTGCCGGG TTCGGCCGGT
GACGCACTGT CCGCTTACGC CGATGCGCTC AATGCGGTCG AGGCGTACGG TGTCCAGTAC
GATCTGCCGT CCTCGGTATC GGTGCAGGTG CTGGCTCAAA GCCAACTGAC CGGTACGGCA
TCGAGCACGC TGCCCAACGG GAACGCGATC AATCTCGGCC AATGGCAGGG CGGCGTGTTC
AATCCGGCTG CGCCCTACAC CCTCGGTCAG TTGGAAGCGA CAGGCGCGCC GCCGCCGTAC
GCTCAGATGC ATCAGTTTAT GGTGTGGGAA TACGTGAATG CAGACTGCAA CAGCGGTAAC
AGCGCGCCAT ACTACGCCCG CTTCCCGCTG CAAGCTGGTC AGCCGGATCT GTTCACCTCC
GGCCAGTGCC CGACCTACAA GAACTACGTC AACACTATTG ATGGAAAGGT TGGCACCAAC
AACCGCAGTC ACGTGCTCGT CACTTCGCCG GGCTATGTGC CGCAAACGGT GCCGGTGGTC
GGCGCCGGTT CGTAA
 
Protein sequence
MKKLTLASLA VVALLSACGG GGDGSASGNG GSDGTGTGPV GTQKTPVNPY TGQAAPGAKT 
TAVTGQVFNS GATAGATVTA YVLNADGRNG TVIGTATSAA DGTFSMTLSQ APYDTASFVR
FVATGGTYTS SADHTVQTNG TLELVTPYIT TQFNNFVITS LTHVASQRMA QVASGGGSIA
TAYTTGAGMV LSLIGFTNAI LPSDQSAGVS YLALVPGSAG DALSAYADAL NAVEAYGVQY
DLPSSVSVQV LAQSQLTGTA SSTLPNGNAI NLGQWQGGVF NPAAPYTLGQ LEATGAPPPY
AQMHQFMVWE YVNADCNSGN SAPYYARFPL QAGQPDLFTS GQCPTYKNYV NTIDGKVGTN
NRSHVLVTSP GYVPQTVPVV GAGS