Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4981 |
Symbol | |
ID | 8017408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 270376 |
End bp | 272004 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644828669 |
Product | hypothetical protein |
Protein accession | YP_002979869 |
Protein GI | 241589844 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0912698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00371341 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTTCCA CTTCCGTACG CATTGCAGTC AACCAGGGCA ACCTGGTCAA GAACCTGAAG TTTGCGTTCT CGAATTTTTC GACTTTCTTG GCCGAACTGA TTCAGAACAG CCGTCGAGCC GACGCCAGCA TGGTCGACAT TCGGCTCGAG GGGAAAACAC TGATCGTCTT CGACGACGGT CAGGGAATCC AGGATTTCCA GAAGCTGTTC ACGATTGCCG AGAGCGGTTG GGATGCTCAG ACACAGTCGC TGGAAAATCC GTTCGGCATG GGCTTCACGA GCGCGCTGTT CGCGTGCGAG ACGCTGAAGG TCGAGTCCTG TGGGCAACGT CTGGAGGCAC GTACTAGCGC CTTGCTCGAG ATGCGCGATC TGATGGTGGA GCCTGGCGAA GTGGTGACTG GGACTCGCCT GACCCTTAGC AACCTGACTT TCGACGAGAA GCGAATTGGC GATGCATTGA AGGAGATTGC CCGAGGCTAT CCGATCCCGA TTCAATTCAA TGGCGTTGAG CTGGAACGCC CAGACTGTCA GGATGACCAA TCATTTGTGG CAACGCCAAT CGGTGCTGTC TCGATTCGAA ACCTGAAGGG GATGGGAATC GGTGGCGGCA TCGTGGTCTA CCTGCAGGGG ATTCGCGTTA TCGGGCACGG CCGCTCTCAG CCCGATGGTG TTGTTCATCT TGATAGCGCG CAGTTCAAGG CAAAGCTTCC AGACCGCAAC TGCCTAATCG ATTCCAATGA CAGAGCAAAA GAGATTGAAG CGCAGGTGAG GGCCGTGGCT CACTCCATGC TCTCTGATCT GCAGAGCAAG ATGGACCCCA TCGACTTTGC CACCTCATAT TGGGACGTTG CTGCCCGTTG CGCTCCGGAT ATTCTTCGGA ATCACCCTGT TGTTCCAGCG AGTGAGGTCA ATGTTCTCGC TAACTTGGTT TGCTTCTCGG AATGGCACGA ACCGTTCGCG TATTCCGGTA AGGATGTACA GGCGCTACAT CGGTCCGATT TTGAGCAAGG AAAGGTTCGC GTAGTGCGCG GCTCGGGAAG AGTTGACCTC GAAGTGGATT TCTACAGTGC CGTTAAGCTG GCCTATGTCA TGAAGATGAA CGCGTATATC GTCGCAGGCA ATCTTCCCAA GGGGCATTGG CTTATGAATG CTCCCGCAGT CGATGAACTG GATGTCAGCT TCGACGTTGT GAGTCCTGGT GTTGTAGCCG GTTCGTGCTA CGAAACCCAC TCATTCGATA TTCAGATCTG TGAGGGTGTT GCTCTCAAGG GTCTCTGGGG TGACGTCGTC GTGACGGATC AGGAGATCGC AATCGGGAGC GGCGAAGACT GGTTGGACAA CGTCACAATC TACAGCCCGC CAAGTGCTGC AAGAGGTGAG GGGGTCCTTC AGTTCACAGT CTTCTCTTCC GACGATAGTC ACGATGAGCA GTACGAACGC GAGTGCTTAG CCAAATACGG GCGGTGGATC ATGCAGGCAA GGAACGTGCA ACCTCAGGAT CTGCTGAACG ATCTTCTGTC GACTATCACC GTGGACACAG ATACCGCACG CAACACGCGG TTTGTTCTGG AAGTGAATGA GCACGGTTAC CTGAACGTAG TTGAACAGCT GACACCTGTG CCGGCATAG
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Protein sequence | MSSTSVRIAV NQGNLVKNLK FAFSNFSTFL AELIQNSRRA DASMVDIRLE GKTLIVFDDG QGIQDFQKLF TIAESGWDAQ TQSLENPFGM GFTSALFACE TLKVESCGQR LEARTSALLE MRDLMVEPGE VVTGTRLTLS NLTFDEKRIG DALKEIARGY PIPIQFNGVE LERPDCQDDQ SFVATPIGAV SIRNLKGMGI GGGIVVYLQG IRVIGHGRSQ PDGVVHLDSA QFKAKLPDRN CLIDSNDRAK EIEAQVRAVA HSMLSDLQSK MDPIDFATSY WDVAARCAPD ILRNHPVVPA SEVNVLANLV CFSEWHEPFA YSGKDVQALH RSDFEQGKVR VVRGSGRVDL EVDFYSAVKL AYVMKMNAYI VAGNLPKGHW LMNAPAVDEL DVSFDVVSPG VVAGSCYETH SFDIQICEGV ALKGLWGDVV VTDQEIAIGS GEDWLDNVTI YSPPSAARGE GVLQFTVFSS DDSHDEQYER ECLAKYGRWI MQARNVQPQD LLNDLLSTIT VDTDTARNTR FVLEVNEHGY LNVVEQLTPV PA
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