Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4961 |
Symbol | |
ID | 8017242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | - |
Start bp | 252694 |
End bp | 253272 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644828649 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_002979849 |
Protein GI | 241589824 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0717313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.154952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGCAA CACGTTCTTC TGGCAAGGCA AAGGCTTCCA AAGAGGATCC CATCCTGCGG CATTGGCACG AGGCCGTCCC GGATGATCGT CTTGCCCACT TGGTCAAGGA CGCAGCCCGC GCGATGGTGC GTGGGCTGCA GATGCGCCTG GCGCAGCACG AGGTCTCATT TGGCCACTGG GCGTTCTTGC GCATCCTGTG GGTCACCGAC GGGCTGACGC AGAAAGAACT CAGCGACGAG GCCGGCACGA CCACGCCAAC CACTTTCAGC GCGGTGTCCG CGATGGAAAA GCTTGGATAC GTCGAGCGTC ACTATGCCCC GGGCAATCGC AAGAACACGC ACGTGTATCT CACGGCTCGC GGCCGTAGCC TGAAGAACAA GCTCGTTCCA CTGGCTGAAG AGGTCAACGA GATCAGCGTC AGGGGCCTGA AGGCAACGGA GATCAACATT GCGCGCAAGG TGCTCCTGAC GATCATCGAA AACATGGCGC GCGACGAAGC CGAGACGGAT GATCCGGCGC TGCGGATTCC GTCCACGCGG GAAATGGGTA GCCTGATCGC CTCGCGCGGC GAGGAGTAA
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Protein sequence | MVATRSSGKA KASKEDPILR HWHEAVPDDR LAHLVKDAAR AMVRGLQMRL AQHEVSFGHW AFLRILWVTD GLTQKELSDE AGTTTPTTFS AVSAMEKLGY VERHYAPGNR KNTHVYLTAR GRSLKNKLVP LAEEVNEISV RGLKATEINI ARKVLLTIIE NMARDEAETD DPALRIPSTR EMGSLIASRG EE
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