Gene Rpic12D_4961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4961 
Symbol 
ID8017242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp252694 
End bp253272 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content61% 
IMG OID644828649 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002979849 
Protein GI241589824 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0717313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.154952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCAA CACGTTCTTC TGGCAAGGCA AAGGCTTCCA AAGAGGATCC CATCCTGCGG 
CATTGGCACG AGGCCGTCCC GGATGATCGT CTTGCCCACT TGGTCAAGGA CGCAGCCCGC
GCGATGGTGC GTGGGCTGCA GATGCGCCTG GCGCAGCACG AGGTCTCATT TGGCCACTGG
GCGTTCTTGC GCATCCTGTG GGTCACCGAC GGGCTGACGC AGAAAGAACT CAGCGACGAG
GCCGGCACGA CCACGCCAAC CACTTTCAGC GCGGTGTCCG CGATGGAAAA GCTTGGATAC
GTCGAGCGTC ACTATGCCCC GGGCAATCGC AAGAACACGC ACGTGTATCT CACGGCTCGC
GGCCGTAGCC TGAAGAACAA GCTCGTTCCA CTGGCTGAAG AGGTCAACGA GATCAGCGTC
AGGGGCCTGA AGGCAACGGA GATCAACATT GCGCGCAAGG TGCTCCTGAC GATCATCGAA
AACATGGCGC GCGACGAAGC CGAGACGGAT GATCCGGCGC TGCGGATTCC GTCCACGCGG
GAAATGGGTA GCCTGATCGC CTCGCGCGGC GAGGAGTAA
 
Protein sequence
MVATRSSGKA KASKEDPILR HWHEAVPDDR LAHLVKDAAR AMVRGLQMRL AQHEVSFGHW 
AFLRILWVTD GLTQKELSDE AGTTTPTTFS AVSAMEKLGY VERHYAPGNR KNTHVYLTAR
GRSLKNKLVP LAEEVNEISV RGLKATEINI ARKVLLTIIE NMARDEAETD DPALRIPSTR
EMGSLIASRG EE