Gene Rpic12D_4960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4960 
Symbol 
ID8017241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp251725 
End bp252570 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID644828648 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_002979848 
Protein GI241589823 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.128821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.104405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTAG CAACCCGCGC GGCAATGACG CGCAATGTCT GCGACGCGCT CGCGGAAGAT 
GTTGGCAATA TCGACTGGAC TTCCCAGCTC GTTGACCCTG CGGCCTCGGC CGAGGCGGTT
CTCACGGTGC GCGAAGCTGC GCTGTTGTGC GGCAGGCCAT GGTTTGAGGA AACCCTGCGG
CGGTACGAGC CGGGCATCAC GATCAGGTGG TTCGTTGGCG AAGGCGAATG GATGCGCGAA
GGGCAGGCGG TGTGCCAGAT CGCCGGGCCG GCGCGCAGCA TTCTGACTGC GGAGCGCACG
GCGCTCAATT TCATTCAACT GCTGTCGGGT GTGGCCACGG CGACGCACGC CCTGGTGGAG
ATCGTAAAGG GCACCAGGGC GCGGATTCTC GATACCCGAA AGACCCTGCC CGGACTGCGT
CTGGCGCAGA AGTATGCGGT GCGCATCGGT GGTGGCGAGA ACCATCGCCG GGGGCTGTAT
GACGGCATCC TGATCAAGGA GAACCACGTC GCAGCGGGTG GTGGCATTGC GCCGACGGTG
CGCGCTGCTC AGGTAATTGG TGCGGGCGTG CCGGTGCAGG TCGAGGTCGA GACGCTGGAT
GAACTGGCAC AAGCGCTCTC CGCAGACGCC GGCGCAATCC TTCTCGATAA TTTCTCGCTG
GAACAGATGC GGGAGGCGGT GCGCATCAAC AACGGGCGCG CCAGCCTGGA GGTGTCAGGC
GGCGTGACGA AGGAAACGCT GCGTGCCATT GCGGAAACGG GCGTGGACCG CATTTCCGTT
GGCGGACTCA CAAAGCACGT CAGGGCAGTG GATTTCTCGC TGCGGGTTGA GGCGCTAGGC
GCGTAG
 
Protein sequence
MDVATRAAMT RNVCDALAED VGNIDWTSQL VDPAASAEAV LTVREAALLC GRPWFEETLR 
RYEPGITIRW FVGEGEWMRE GQAVCQIAGP ARSILTAERT ALNFIQLLSG VATATHALVE
IVKGTRARIL DTRKTLPGLR LAQKYAVRIG GGENHRRGLY DGILIKENHV AAGGGIAPTV
RAAQVIGAGV PVQVEVETLD ELAQALSADA GAILLDNFSL EQMREAVRIN NGRASLEVSG
GVTKETLRAI AETGVDRISV GGLTKHVRAV DFSLRVEALG A