| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4801 |
|---|
| Symbol | |
|---|
| ID | 8017513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | - |
|---|
| Start bp | 136970 |
|---|
| End bp | 137353 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644828490 |
|---|
| Product | helix-turn-helix domain protein |
|---|
| Protein accession | YP_002979690 |
|---|
| Protein GI | 241589665 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCT TGGGTGAAGT TTCGAAGGTA CTTGCAGAGC GCGCGGCCAA GCGCCGCTAC
GGCAAGATGC AGCTTGCCGC CGACGCGGGC GTCACATACC GCACGCTTAG CCACGTGCTG
AGCGGAGAGC AGGACTTCAA AGTTTCGACG CTCATGGCAG TGGCCGACCG GCTCGGCCTA
GAACTCGTGC TGGTCCCAAA AGAGGCGCGC GCGATGTTTT CATCTGCCAA CCTGCATACA
GCCAGGGTCC CGGACACCCC TGCCCCTCGC CTCATCATCA AGGGATTAAA AGCCTCGCTC
GCTGATTCCG GCAAGGATCA CTCACCGGGG ATTGTGAGCA AAGTCCAAGC GCGACTGGCA
CGCGCCCGTA AGCGGAGTCT GTGA
|
|---|
| Protein sequence | MKSLGEVSKV LAERAAKRRY GKMQLAADAG VTYRTLSHVL SGEQDFKVST LMAVADRLGL
ELVLVPKEAR AMFSSANLHT ARVPDTPAPR LIIKGLKASL ADSGKDHSPG IVSKVQARLA
RARKRSL
|
|---|
| |