| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4741 |
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| Symbol | |
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| ID | 8017316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | + |
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| Start bp | 85632 |
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| End bp | 87521 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644828430 |
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| Product | hypothetical protein |
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| Protein accession | YP_002979630 |
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| Protein GI | 241589605 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.404612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG ATTTCCAGAA TCTCTTTCGC CCGACGTACG AGGCTAGGTC TGCGGCGGCG
TGGGGCGTAT CACTGGTGTC GATGACAGGC ATCGCTCTGA GTTCGGACAT CAGCACATCG
GCCTTCCTTT GGATGGGCGC AGGTTCTGCT GGCATGCTGC TTTGGCGAGG GAGTCAGGCG
AAGCGGATCT GGGACTTCAA GGCCAACTTG GCCGGCAAGC CGTTCACCTT CCTCAAGGCC
GAGGTGGTTC GGAAGAATAT CCCGAAGTTC GGCGACAACT TGTGGTTGGG TTGGGGATTC
AGGTGGGAAC CGAGTCACAC CCAGCAGGCG ACTGAGATCA TGAAGCGAGA TCTCGCAGCA
GTGTATCCGC CGAAGTGGTT CTTGAAGGCT CGAGGCCTGA AAGGGTCGCA ACTCGATCCG
AAAAATGCGA AGGGTCTCCA GTGGATTCAC GGACTCGCTG AAGAAAGCGA CATGCTAATG
CCTTTGTCTG CAATGCAAGG GCATACGGCA GTTTTGGCGA CGACCGGCGC GATCAAGACA
ACGTTGTACA GCCTGTTGGT GTACCAGCTC GCGTTGCGCG GTTACACGAT CGTCATCCTT
GATCCGAAGG GCGACCACGA TTTGAAGGAG ATCGCGCGGA ATGCTGGCAC GCTATCAGGG
CGGCCCGAGA AGGTGCTTAC GTTCCACCCT GCCTTCCCCT CGGAGTCAGT GCGCATTGAT
ACGCTGAAGA ACTGGGATCG AGAAACACAG GTTGCTTCCC GCATTTCGTC CTTGATTCCT
TCTGATGGCG ACGAATCGTT TCGATCCTTC GTGTGGATGC AGGTCAACCA TGTGGCGCAG
GCGCAAATCT ACACCGGAAC TCGACCGTCC TGGTCGTCGC TTCTCGACTC AATTCAAAAC
CTGAACGGCG CACAGAAACT CCTGGAGAAA GCGCTGAGGA AGTTTTTCAC CCTCAACGTT
TCACTTTGGG AGAGCCAGGT AGCACCGCTT GTTTCCAAAT ACAACAAGCC GGGAGAACGA
AAGAGCAGCG ACATGGATGG CGCGTCCGCT GAGTTGCGCG CCTATGTCGA GTTCTTCGAG
ACGGCGGTTC CAGAGCGTGA ACAACCCCGG CAGATCAAGG GACTGATTAG CACGGTTCGA
TCAAATCGCG AGTGGTTTGC GAAGATGATG GTCTTGCTGC TTCCTCTCCT AACCAAACTC
ACCGCCGGCG AACTGGAGGG GCTACTCAGT CCCGACTACG ACGATATTGA TGACCCGCGA
CCGATCTTCG ACACCAAGAA AATCGTGGAG GGGGGGTACA TCTTCTATGC GGGCCTCGAT
TCGCTGAGCG ACCCGGAGGT CGGTTCTGCT ATCGCCGCCG CAATTCTTTC TGATCTGCAG
GCTGTCGCAG GGGAGCGATA TAACTACGAC AAGAACGTCA AAGAGAAGCC CCGGGTGATT
GTGCTCCTCG ATGAGTGGGG CGATCTCATG TGCGAGCCAG TAATTCAGGA ACTCAACAAA
GGTCGTGGCG CTGGCCTTGA CTTCATTGCG TGTGGGCAGA CGTTCTCCGA CCTCGCTGAC
AAACTTGGGT CGGAGGTCAA AGCGAAGCGG ATGATCGGCA ACTTCAACAA CTTGATCGCG
GGCGCAACGC AAGATGCCGA CACGCAAGAG TTGATTGCCG AAAAGATCGG CGAGACCTTC
ATCAAGAAGG TTTCGAGGAG CCATGGCCGT AACTCGAAGA CAGAGGACCA CGGCATTGAG
TTTGGCGGCT CGGTGAGCGA AACGGTGTCG GAGGAAGCTA CGGAACTCTT CCCAATCACG
CTCATGAGCA AGCTTCCCGA CCTGCACTAC ATGGCGGTCT GGAACCGAGG CACGGTCATC
AAGGGGCGCA TTCCAAAGCT CGTTCTCTAA
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| Protein sequence | MIIDFQNLFR PTYEARSAAA WGVSLVSMTG IALSSDISTS AFLWMGAGSA GMLLWRGSQA
KRIWDFKANL AGKPFTFLKA EVVRKNIPKF GDNLWLGWGF RWEPSHTQQA TEIMKRDLAA
VYPPKWFLKA RGLKGSQLDP KNAKGLQWIH GLAEESDMLM PLSAMQGHTA VLATTGAIKT
TLYSLLVYQL ALRGYTIVIL DPKGDHDLKE IARNAGTLSG RPEKVLTFHP AFPSESVRID
TLKNWDRETQ VASRISSLIP SDGDESFRSF VWMQVNHVAQ AQIYTGTRPS WSSLLDSIQN
LNGAQKLLEK ALRKFFTLNV SLWESQVAPL VSKYNKPGER KSSDMDGASA ELRAYVEFFE
TAVPEREQPR QIKGLISTVR SNREWFAKMM VLLLPLLTKL TAGELEGLLS PDYDDIDDPR
PIFDTKKIVE GGYIFYAGLD SLSDPEVGSA IAAAILSDLQ AVAGERYNYD KNVKEKPRVI
VLLDEWGDLM CEPVIQELNK GRGAGLDFIA CGQTFSDLAD KLGSEVKAKR MIGNFNNLIA
GATQDADTQE LIAEKIGETF IKKVSRSHGR NSKTEDHGIE FGGSVSETVS EEATELFPIT
LMSKLPDLHY MAVWNRGTVI KGRIPKLVL
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