| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4727 |
|---|
| Symbol | |
|---|
| ID | 8017304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | + |
|---|
| Start bp | 70003 |
|---|
| End bp | 70686 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644828418 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002979618 |
|---|
| Protein GI | 241589593 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.198002 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.221757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTACG CTTCCGAGCG TGACGCGAAG TTGGGTAGGA CGATCGGATC CAACGCGATG
TGGCATCAAT CCGGGGCCAC CAGTGTTCGG CAGGTGACAG CCATATTGGT CGACTGTGGC
ACGGCAGTGC CGACCGTCGT CATCGATCTT AACGACATCC GGCAATACCT TGGGACAAGC
ATCAACGCTG CTGTGCCACT ACCTTTCAAA CTCGGTTCCT TGCAGCGTCA GTCCGAACCG
ACGCTGACAA CGCCGGCTGA GATGGTGGAG GAATTGCGCC GGGCTTTCGG GCTCAACGTC
ACACAACTCG CACAAGTCCT GCATATCGAG CGCATCACAG TCTACGCATG GCTGCGCACC
GAACGGATGG AAAAACTCAA TCTGTCCAAT CGCACCCGCT TGTGGCGCTT GTACCAGCTC
GCCAAGCAAT GGGGCAACTA TGCACCGCTG GCAGGAAAAT ACTTGGTCGA ACCAATTCCA
GGGCGAAACA CGACGCTGTT ACAGATGCTC AGTGCATCTC AGCTGGATTC TGGCGAATTC
GCGCAGGTGT ATGAACTGCT GGCGCGAGCG ACCAACCCAG CCACGCGTAT CCAGCAGCAT
CGCGCTGAGC AACACGTCGC ATTGAAGAAG AGTATCGAAA ACCTGCGGAA GAACGCGGGC
AAGTTCGGGA TGGATCTGGA TTGA
|
|---|
| Protein sequence | MIYASERDAK LGRTIGSNAM WHQSGATSVR QVTAILVDCG TAVPTVVIDL NDIRQYLGTS
INAAVPLPFK LGSLQRQSEP TLTTPAEMVE ELRRAFGLNV TQLAQVLHIE RITVYAWLRT
ERMEKLNLSN RTRLWRLYQL AKQWGNYAPL AGKYLVEPIP GRNTTLLQML SASQLDSGEF
AQVYELLARA TNPATRIQQH RAEQHVALKK SIENLRKNAG KFGMDLD
|
|---|
| |