| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4724 |
|---|
| Symbol | |
|---|
| ID | 8017301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | - |
|---|
| Start bp | 67607 |
|---|
| End bp | 68809 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644828415 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002979615 |
|---|
| Protein GI | 241589590 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0242073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.178225 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAA AACCGGTCGT TCTTGACTCA GTGCTCGCAC CGTTCCTTGC GGCGGGGCTG
CGAGTAACGG TGCAGGGGGC GCACCTGCTT CTGCACGACG TGCCCGTGGT CGACAACCAG
AGGCAACTGC GGCTGGGCAC CCTCGTCGCG ACGCTCGTCT ATACCGACAG CCAGGTGACA
CCACCGGCGA CCCATCAAGC GTGGTTCGAT GGCCCGTTCC CTTGCTTCGC GAACGGCTCC
ACGATGGAGC AGTTGCGACA CACGGACGTG GCGGGGGGAA TCGTGGCTCC TGGCGTTCCG
GCCAAGTTCT TCTTCTCGAA CAAGGATGAC GGCTGGACGA GTTACGCCAC CCACTTTGAC
CAACTGATGC ACTACTGGCG GATCATCACG GACCAAGCGC GAGTAATTGA TCCAGACTGC
ACCCGCCCCT TGGGTCCTGG GTCGTCGCTG GTGGCACCTC GAACGGACCC ATTCCGCTAT
CCGGACGCCT GCTCAGCGCG CGGAAACTTC GTGATGGTCT CAGAGCGGCT AGCGAATCTC
CGCATTGCAA TCGTGGGGCT GGGCGGGACG GGGTCCTATG TGCTCGACCA AGTAGCCAAG
ACGCCGGTAC GTGAGATCCA CCTGTTCGAC GGCGATGTCT TCGAGGTCCA CAACGCCTTC
CGGGCGCCCG CGGCAGCCAG TGAATCTGAT TTCGGCAAGA CCAAGGTTGC GTACTTCTCC
GCGCTGTATG AACCTATGCG GACAAGCATC ATCGAACATC CTGCGTACGT GACGGAAGTC
AATGTTGGAC TGCTCGGGCA GTTTGACTTC GTGTTCGTCT GTGTAGACAA GGGGCCCGCG
CGGAGATTGA TCTGCTCCCA TCTCATCGAC CAGGGCGTGC CCTTTATCGA CTGTGGTATG
GACATGTCGC TGTCTACCGC GCAGCAGATC TTTGGTACGT GTCGAGTCAC AATAGCCACG
CCAGCAAGGA ACAAGCACTT CTTCGATCGC GCTCCAACGA TGGAAGATGC CGGTGATGCG
CTGTACGACC AGAACATTCA GATTGCTGAC GCCAACGCCC TCAACGCTAT CCTCGCCGTC
ATGCGTTGGA AGCAGCACTT CGGCTTCTAT GCGATGAATT GGGACTGGCA CCACCTCGAA
TTTGCCACCA GTGCGATGGC TTTGGCGAGG GCCGAGAGAT CAGAGGGAAC GGATGCGAAT
TGA
|
|---|
| Protein sequence | MSAKPVVLDS VLAPFLAAGL RVTVQGAHLL LHDVPVVDNQ RQLRLGTLVA TLVYTDSQVT
PPATHQAWFD GPFPCFANGS TMEQLRHTDV AGGIVAPGVP AKFFFSNKDD GWTSYATHFD
QLMHYWRIIT DQARVIDPDC TRPLGPGSSL VAPRTDPFRY PDACSARGNF VMVSERLANL
RIAIVGLGGT GSYVLDQVAK TPVREIHLFD GDVFEVHNAF RAPAAASESD FGKTKVAYFS
ALYEPMRTSI IEHPAYVTEV NVGLLGQFDF VFVCVDKGPA RRLICSHLID QGVPFIDCGM
DMSLSTAQQI FGTCRVTIAT PARNKHFFDR APTMEDAGDA LYDQNIQIAD ANALNAILAV
MRWKQHFGFY AMNWDWHHLE FATSAMALAR AERSEGTDAN
|
|---|
| |