Gene Rpic12D_4714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4714 
Symbol 
ID8017291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp52384 
End bp53205 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content55% 
IMG OID644828405 
Productflagellin domain protein 
Protein accessionYP_002979605 
Protein GI241589580 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0875271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATTA GCCTCAACAC CAACGTTTCA TCTCTGCAGA CGCAACAAGC ACTGTCTCAA 
TCCAGATCAG CTTTGGAAAC CTCTCTGCAG CGTTTGTCGA CGGGCCTGCG TGTGAATAGC
GCCAAGGATG ACGCGGCCGC TTACGCGGTG GCCAGCAGCC TGACCACCAC GCTGAACTCG
CAAACGCAGG GTATTCAGAA CGCGAACAAT GCGTTGTCGT ACTTGCAGAC GGCAGATTCG
TACATGGGAC AGGTTGAAAA CAACCTGCAG CGCATGCGCC AGCTAGCCGT TGAAGCCAAC
AACGGTGGCC TGTCGACGAC TGATCAGGCC AACCTTGACA AGGAATTTCA AGTGCTGGCT
TCGGCCAACA AGAACATCCA GTCGAACGCG AACTACAACG GCGCAAAGCT GTTTGACGGG
ACGGTGACGT CCACCACGTT CCAGTATGGG CAAAACGCCA CAACGGATGT CGCGACCATT
TCCAACGCCA ACTTGTCGAG CTTTGGGACG CTAAGCGGGA CAAGTGTTAC TTCGGCGTCG
AATGCTACGG CTGCGCAGTC GAAGATCGAC TCGGACCTTG TTAGCTTGAA GGCCGCACGC
GCCAACCTTG GCGCTCAGCA AAGCGGACTG AACTCGACGA TCAGCACGTT GACATCGTCA
AACACCGCGC TTGCGGCTGC AAAGTCGACC ATGATCGATA CCGATTACGC GGCTGAAACA
TCGAACATGA CCCGACAAAA CATCCTACAG CAAGCCGGCA CGGCAATGCT CGCACAAGCC
AATGCCGCCC CAAATAGCAT TCTGAATCTT CTCAAAGGCT GA
 
Protein sequence
MPISLNTNVS SLQTQQALSQ SRSALETSLQ RLSTGLRVNS AKDDAAAYAV ASSLTTTLNS 
QTQGIQNANN ALSYLQTADS YMGQVENNLQ RMRQLAVEAN NGGLSTTDQA NLDKEFQVLA
SANKNIQSNA NYNGAKLFDG TVTSTTFQYG QNATTDVATI SNANLSSFGT LSGTSVTSAS
NATAAQSKID SDLVSLKAAR ANLGAQQSGL NSTISTLTSS NTALAAAKST MIDTDYAAET
SNMTRQNILQ QAGTAMLAQA NAAPNSILNL LKG