| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4708 |
|---|
| Symbol | |
|---|
| ID | 8017286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | - |
|---|
| Start bp | 44439 |
|---|
| End bp | 45569 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644828400 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002979600 |
|---|
| Protein GI | 241589575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.993904 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0847852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTC TTAGCGCATT CTCCCAAGCC GGCGCTCGCA CATCAAAATG GGCGATTGAA
CTGCTTGACG CTAACGGCGC GTTCCAAGGC GCTGCCACTG AAATCTGGGC GCACTACAAG
GCGCCCATCG CGCTACTTGC GGCGGGGCAC CGCGCCCAGG CTGATCAGGT GCTGGGCCAT
CTGTGCAGGC ATTTTCTGCG CAACGGCGAT TTTCATTATG GTGCGGGCGA TCCCACGCCG
GCGCCGGGTT CCAACTACCG CAACGGCTGG ATCGCCTGGG GAGCGCACCA GCTCGGCGCC
TACGATGTTT CCGGCCCCGT TCTTGATTTT CTTGAATCAC AGATCCACCC CGAAAGAGGT
GGTGTGCTGG ACTTCGACAC CGCCAGCACC ATGCACCGGA TGCTGGACAT TGGTACCACC
GCCAGCGTCG TCAATGCTCT ACTGATTGCC GGTCGCATCG AAGCGGCGAC CAAAGCGGCG
CGGATGTTCC ACCGCGTGTT TGGTCCTGCT GCGGGTGCGG ACGGCCGAGT CCTGCTGCGC
GAAAGCTGGG ACGGACAAAT GCTGGAGCCC GAGCGCCTCT CCACAGTGCT CAAGTTCATG
ACCATGCGCG ACGGCTGCCG TGTTCCGCAG GAATGGGCAG CGCTAGCGCG GGGGCGTTCC
GTGCTGTCGC GCATTCGACA GGCATCAAAG GGCCAGGGTG GGCAGCTCAA TGGTTTGCTT
GCGATCGAGT TGAACCGGGG CGGACAGATC TACTGGTTCC TTGGCTTTTC GATGCGCGTC
CTGGCGCAGC TGTTTCGAGC CACAGGCGAT CAGGCATGGC TGACGCTGGG GCATCGTGTC
GGAGGTCTCG TGGGACGTTG CCAACCAGAC ATCTACAACA GTGCCACCAG TGCGAAAGTC
GCATGGGGGG CGGCCGAGAT GTATGCCGTG AGCGGGGACC GCCGGTACTT CGATCTATCG
ATGCGGATCG CCGACTGGCT CATCTCAACG CAAGAGCCTG GGGGCATATG GCTGCGGCGC
CCACAGTACG AGAGGATCGA GGCCCAGCCA CTGTCCGTCT CGCTGGATAC CTCGCTGGAG
CGGGTTGTTT ACATGTACGA GATCCCGCGC GCGCTCGGTT TGTCTGAATA G
|
|---|
| Protein sequence | MASLSAFSQA GARTSKWAIE LLDANGAFQG AATEIWAHYK APIALLAAGH RAQADQVLGH
LCRHFLRNGD FHYGAGDPTP APGSNYRNGW IAWGAHQLGA YDVSGPVLDF LESQIHPERG
GVLDFDTAST MHRMLDIGTT ASVVNALLIA GRIEAATKAA RMFHRVFGPA AGADGRVLLR
ESWDGQMLEP ERLSTVLKFM TMRDGCRVPQ EWAALARGRS VLSRIRQASK GQGGQLNGLL
AIELNRGGQI YWFLGFSMRV LAQLFRATGD QAWLTLGHRV GGLVGRCQPD IYNSATSAKV
AWGAAEMYAV SGDRRYFDLS MRIADWLIST QEPGGIWLRR PQYERIEAQP LSVSLDTSLE
RVVYMYEIPR ALGLSE
|
|---|
| |